Job Description P60560 Confidence 82.82% Date Thu Jan 5 12:06:53 GMT 2012 Rank 293 Aligned Residues 145 % Identity 17% Template d2d69a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.90

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		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.										.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																					.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	.	.	.	.	.	G	T	S	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	.	.	.	.	.	.	.	.	.	F	V	Q	F	V	A	K	A	R	E	A	W	P
Query Conservation																					.	.	.	.	.																																			.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.																		.																	.	.	.	.	.	.	.	.	.
Template Conservation																																											.
Template Sequence		V	Q	G	I	R	E	F	M	G	V	K	D	R	P	L	T	A	T	V	P	K	P	K	M	G	W	S	V	E	E	Y	A	E	I	A	Y	E	L	W	S	G	.	G	I	D	L	L	K	D	D	E	N	F	T	S	F	P	F	N	R	F	E	E	R	V	R	K	L	Y	R	V	R	D	R	V	E	A	E	T	G
Template Known Secondary structure										T			S	S								S	S	S	S																	T	.	T		S						T	T		S		B	T	T	B																					S
Template Predicted Secondary structure																																											.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.						.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.																																																										.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.																																																										.	.	.	.	.	.	.
Query Sequence		T	K	T	I	C	A	G	N	V	V	T	.	.	.	.	.	G	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	.	.	.	.	.	.	.
Query Conservation													.	.	.	.	.																																																										.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	T	K	E	Y	L	I	N	I	T	G	P	V	N	I	M	E	K	R	A	E	M	V	A	N	E	G	G	Q	Y	V	M	I	D	I	V	V	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	S	A	L	Q	Y	M	R	E	V	T	E	D	L	G	L	A	I	H	A	H	R	A	M	H	A	A
Template Known Secondary structure		S							B			S	S															T													.	.	.	.	.	.	.	.	.	.	.	.	.	.															T								T	T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.															.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
							219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																	.
Query SS confidence		.	.	.	.	.																	.
Query Sequence		.	.	.	.	.	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	.	G	A	D	F	V	M	L	G	G	M	L
Query Conservation		.	.	.	.	.																	.
Alig confidence		.	.	.	.	.									.								.
Template Conservation															.
Template Sequence		F	T	R	N	P	R	H	G	I	T	M	L	A	.	L	A	K	A	A	R	M	I	G	V	D	Q	I	H	T	G	T	A	V
Template Known Secondary structure				S		T	T	S	S						.									T		S
Template Predicted Secondary structure															.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions