Job Description P60560 Confidence 44.89% Date Thu Jan 5 12:06:53 GMT 2012 Rank 414 Aligned Residues 149 % Identity 13% Template d1yrra2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain Resolution 2.00

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110																		.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																				.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	M	A	S	A	L	A	S	F	D	I	L	T	A	V	H	K	.	.	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	T	K	Q	I	L	D	L	N
Query Conservation																				.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	M	Q	K	A	N	E	K	S	G	C	T	N	Y	L	P	T	L	I	T	T	S	D	E	L	M	K	Q	G	V	R	V	M	R	E	Y	L	A	K	H	P	N	Q	A	L	G	L	H	L	E	G	P	W	L	N	L	V	K	K	T	H	N	P	N	F	V	R	K	P	D	A	A	L	V	D	F	L	C	E
Template Known Secondary structure											T	T																															T	T	S	B								S	S				S						S		S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	T	G	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S
Query Conservation
Alig confidence																			.	.												.																																								.	.	.	.	.	.	.	.	.
Template Conservation																			.	.												.																																								.	.	.	.	.	.	.	.	.
Template Sequence		N	A	D	V	I	T	K	V	T	L	A	P	E	M	V	P	A	.	.	E	V	I	S	K	L	A	N	A	G	I	.	V	V	S	A	G	H	S	N	A	T	L	K	E	A	K	A	G	F	R	A	G	I	T	F	A	T	H	L	Y	N	A	M	P	Y	I	T	G	R	E	.	.	.	.	.	.	.	.	.	P
Template Known Secondary structure		T	T	T	T								G	G	G	S			.	.									T	T		.						S															T					S	S	T	T	T	T	S					S	S		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.												.																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.										.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	A	G	A	I	L	D	E	A	D	I	Y	C	G	I	I	A	D	G
Template Known Secondary structure											T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions