Job Description P60560 Confidence 31.26% Date Thu Jan 5 12:06:53 GMT 2012 Rank 479 Aligned Residues 158 % Identity 16% Template d1ykwa1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.00

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.									.	.	.	.	80	.	.	.					.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.
Predicted Secondary structure																					.	.								.	.	.	.	.	.	.	.									.	.	.	.																													.
Query SS confidence																					.	.								.	.	.	.	.	.	.	.									.	.	.	.																													.
Query Sequence		I	A	A	N	M	D	T	V	G	T	F	S	M	A	S	A	L	A	S	.	.	F	D	I	L	T	A	V	.	.	.	.	.	.	.	.	H	K	H	Y	S	V	E	E	.	.	.	.	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	.	K	T	K
Query Conservation																					.	.								.	.	.	.	.	.	.	.									.	.	.	.																													.
Alig confidence																					.	.								.	.	.	.	.	.	.	.									.	.	.	.																													.
Template Conservation
Template Sequence		V	V	K	P	N	I	G	L	S	P	G	E	F	A	E	I	A	Y	Q	S	W	L	G	G	L	D	I	A	K	D	D	E	M	L	A	D	V	T	W	S	S	I	E	E	R	A	A	H	L	G	K	A	R	R	K	A	E	A	E	T	G	E	P	K	I	Y	L	A	N	I	T	D	E	V	D	S	L	M	E	K
Template Known Secondary structure				S	S		S	S																T	T		S						T	T		S	S	B	T	T	B																					S	S												G	G	G
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.														.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	V	T	G	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.														.										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.														.
Template Sequence		H	D	V	A	V	R	N	G	A	N	A	L	L	I	N	A	.	.	.	.	L	P	V	G	L	S	A	V	R	M	L	S	N	.	Y	T	Q	V	P	L	I	G	H	F	P	F	I	A	S	F	S	R	M	E	K	Y	G	I	H	S	K	V	M	T	K	L	Q	R	L	A	G	L	D	A	V	I	M	P	G	F
Template Known Secondary structure									T									.	.	.	.														.			S	S							T	T	T						S	T	T	S	S														T		S							S
Template Predicted Secondary structure																		.	.	.	.														.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.					.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																.	.	.	.	.
Query SS confidence																																.	.	.	.	.
Query Sequence		P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	.	.	.	.	.	L	G	G	M	I	V	S	D	G	G	C
Query Conservation																																.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.
Template Sequence		G	D	R	V	M	T	P	.	.	.	.	.	.	.	.	.	.	E	E	E	V	L	E	N	V	I	E	C	T	K	P	M	G	R	I	K	P	C	L	P	V	P	G	G	S	D
Template Known Secondary structure		S	T	T	S	S	S		.	.	.	.	.	.	.	.	.	.													S			T	T											S	B
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		325	.	.	.	.	330	.											.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions