|   |
47 | . | . | 50 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
| . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | P | I | I | A | A | N | M | D | . |
. |
. |
. |
. |
. |
T | V | G | T | F | S | M | A | S | A | L | A | S | F | D | I | L | T | A | V | . |
. |
. |
. |
. |
. |
. |
H | K | H | Y | S | V | E | E | W | Q | A | F | I | N | N | S | S | A | D | V | L | K | H | V | M | V | S | T | G | T | S | D | A | D | F | E | K | T |
Query Conservation |   |
  |
|
|   |   |
|
|
|   | . | . | . | . | . | . |   |   |   |   |   |   |
|
|   |
|   |
|   |   |
|   |   |
|   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
|   |
|
|   |
|   |
|
|
|
|
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   | . |   |
|   |
|
|   |   |   |
|   |   |   |   |
|   |
Template Sequence |   |
I | T | P | I | I | T | P | F | T | K | D | N | R | I | D | K | E | K | L | K | I | H | A | E | N | L | I | R | K | G | I | D | K | L | F | V | N | G | T | T | G | L | G | P | S | L | S | P | E | E | K | L | E | N | L | K | A | V | Y | D | V | T | N | K | . |
I | I | F | Q | V | G | G | L | N | L | D | D | A | I | R |
Template Known Secondary structure |   |
 |  |  |
|
|
|
| B |
| T | T | S | S | B |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | S | S | T | T | T | T | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
| . |  |  |  |  |
|
|
| S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | |
|
|
|
. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | Q | I | L | D | L | N | P | A | L | N | F | V | C | I | D | V | A | N | . |
. |
. |
. |
G | Y | S | E | H | F | V | Q | F | V | A | K | A | R | E | A | W | P | T | K | T | I | C | A | . |
. |
. |
. |
. |
. |
. |
G | N | V | V | T | G | E | M | C | E | E | L | I | L | S | G | A | D | I | V | K | V | G | I | G | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   | . | . | . | . | . | . | . |
|   |
|   |
|   |
|   |
|   |   |
|   |   |
|
|
|
|   |
|   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
  |
|   |   |
|   |   |   |
|
|
|   |
|
|
|   |   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|   |   | . |   |
|
|   |
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |
| . | . |   |   |
|   |
|
|
|   | . | . | . | . |
Template Sequence |   |
L | A | K | L | S | K | D | F | D | I | V | G | I | A | S | Y | A | P | Y | Y | Y | P | R | M | S | E | K | H | L | V | K | Y | F | K | T | L | C | E | V | S | P | . |
H | P | V | Y | L | Y | N | Y | P | T | A | T | G | K | D | I | D | A | K | V | A | K | E | I | . |
. |
G | C | F | T | G | V | K | D | . |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  | G | G | G | S |
|
| S |  |  |  |  |  |
|
|
| S |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | . | S |
|  |  |  |  |  |
|  |  |  |  | S |
|
|
|
|  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |  | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |
|
| . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | |
. | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | |
|
. | 150 | . | . | . | . | . | . | |
|
|
|
  |
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | S | V | C | T | T | R | V | K | T | G | V | G | Y | P | Q | L | S | A | V | I | E | C | A | D | A | A | H | G | L | G | G | M | I | V | S | D | G | G | C | T | T | P | G | D | V | A | K | A | F | G | G | G | A | D | F | V | M | L | G | G |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|   |
|   |
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |
|   |   |
| . | . | . |   |
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | I | E | N | I | I | H | T | L | D | Y | K | R | L | N | P | N | M | . |
. |
. |
L | V | Y | S | G | . |
. |
. |
S | D | M | L | I | A | T | V | A | S | T | G | L | D | G | N | V | A | A | G |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . |
|
| S |
|  |  |  |  |  |  |  |  |  |  |
| T | T | S | . | . | . |  |  |  |  |
| . | . | . |
| S | T | T |  |  |  |  |  |  | T | T |
|
|  |  |  |
| G | G |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . |  |  |  |  |
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
157 | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | |
|
|
. | . | . | . | . | |
|
|
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
  |