Job Description P60560 Confidence 98.99% Date Thu Jan 5 12:06:53 GMT 2012 Rank 93 Aligned Residues 193 % Identity 20% Template d1vjia_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.00

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.							.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.	.	.	.	80																				.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.															.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.															.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	T	F	K	H	S	G	Q	S	W	S	G	V	P	I	I	A	A	N	M	D	.	.	.	.	.	.	T	V	G	T	F	S	M	A	S	A	L	A	S	F	.	.	D	I	L	T	A	V	H	K	H	Y	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	E	W	Q	A	F
Query Conservation																							.	.	.	.	.	.															.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.															.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	T	P	Y	K	M	G	R	F	N	L	S	H	R	V	V	L	A	P	L	T	R	Q	R	S	Y	G	N	V	P	Q	P	H	A	A	I	Y	Y	S	Q	R	T	T	P	G	G	F	L	I	T	E	A	T	G	V	S	D	T	A	Q	G	Y	Q	D	T	P	G	I	W	T	K	E	H	V	E	A	W	K	P	I
Template Known Secondary structure		G	S					T	T				S		S											S	G	G	G													T			T	T						S				S	S	T	T				S	T	T			B		S	S
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.																																																		.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	K	Q	I	L	D
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	A	V	H	A	K	G	G	I	F	F	C	Q	I	W	H	V	G	R	V	S	N	S	G	F	Q	P	N	G	K	A	P	I	S	C	S	D	K	P	L	M	P	Q	I	R	S	N	G	I	D	E	A	L	F	T	P	P	R	R	L	G	I	E	E	I	P	G	I	V	N	D	F	R	L	A	A	R	N	A
Template Known Secondary structure								T	T											T	T	S	S		G	G	G	S	G	G	G						S	S				S		T	T		B		S	S	S	S	S	B	S	S								G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.																									.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	E	A	G	F	D	G	V	E	I	H	G	A	N	G	Y	L	I	D	Q	F	M	K	D	T	V	N	D	R	T	D	E	Y	G	G	S	L	Q	N	R	C	K	F	P	L	E	I	V	D	A	V	A	K	E	I	G	P	D	R	V	G	I	R	L	S	P	F	A	D	Y	M	E	S	G	D	T	N	P	G	A
Template Known Secondary structure					T		S								T	T	S								T	T	T					S	T	T	S	S	S																					G	G	G							T	T			T	T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
			161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.
Predicted Secondary structure		.																																																																												.
Query SS confidence		.																																																																												.
Query Sequence		.	T	G	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	.	A	D	F
Query Conservation		.																																																																												.
Alig confidence		.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.													.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		L	G	L	Y	M	A	E	S	L	N	K	Y	G	I	L	Y	C	H	V	I	E	A	R	M	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	P	M	R	K	A	F	K	G	T	F	I	S	A	G	G	F	.	T	R	E	D	G	N	E	A	V	S	K	G	R	T	D	L
Template Known Secondary structure										T	T	T	T	T		S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S						S	S		.											T	T	S		S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.																				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		239	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	L	G	G	M	L	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	Y	G	R	W	F	L	A
Template Known Secondary structure					S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions