Job Description P60560 Confidence 99.78% Date Thu Jan 5 12:06:53 GMT 2012 Rank 52 Aligned Residues 188 % Identity 17% Template d1vhna_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.59

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																																				.	.	.	.
Query SS confidence																																																				.	.	.	.
Query Sequence		V	P	I	I	A	A	N	M	D	T	V	G	T	F	S	M	A	S	A	L	A	S	F	D	I	L	T	A	V	H	K	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	.	.	.	.	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A
Query Conservation																																																				.	.	.	.
Alig confidence																																																				.	.	.	.																									.
Template Conservation																																																																																.
Template Sequence		V	K	V	G	L	A	P	X	A	G	Y	T	D	S	A	F	R	T	L	A	F	E	W	G	A	D	F	A	F	S	E	X	V	S	A	K	G	F	L	X	N	S	Q	K	T	E	E	L	L	P	Q	P	H	E	R	N	V	A	V	Q	I	F	G	S	E	P	N	E	L	S	E	A	A	R	I	L	S	E	.	K
Template Known Secondary structure										T	T	T		S									T	T	T							S									T	T								S			T	T		T	T								S													T	T	.	T
Template Predicted Secondary structure																																																																																.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.
		123	.	.	.	.	.	.	130	.	.	.																.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Query Sequence		L	N	F	V	C	I	D	V	A	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	.	.	.	.	.	.	T	G	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.										.	.	.	.	.	.																			.	.	.
Template Conservation																																													.																																		.	.	.
Template Sequence		Y	K	W	I	D	L	N	A	G	C	P	V	R	K	V	V	K	E	G	A	G	G	A	L	L	K	D	L	R	H	F	R	Y	I	V	R	E	L	R	K	S	V	S	.	G	K	F	S	V	K	T	R	L	G	W	E	K	N	E	V	E	E	I	Y	R	I	L	V	E	E	G	V	D	E	V	F	I	.	.	.
Template Known Secondary structure			S																T	T		G	G	G	G	G	S																	S	.	S								S		S	S	S													T	T							.	.	.
Template Predicted Secondary structure																																													.																																		.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	.	G	A	D	F	V	M	L	G	G	M	L	A	G
Query Conservation																																																							.
Alig confidence		.	.	.																								.	.	.	.	.																							.
Template Conservation		.	.	.																								.	.	.	.	.
Template Sequence		.	.	.	H	T	R	T	V	V	Q	S	F	T	G	R	A	E	W	K	A	L	S	V	L	E	K	.	.	.	.	.	R	I	P	T	F	V	S	G	D	I	F	T	P	E	D	A	K	R	A	L	E	E	S	G	C	D	G	L	L	V	A	R	G	A	I	G
Template Known Secondary structure		.	.	.		S	S		T	T	T	T	T	S	S				G	G	G	G	G	G	S			.	.	.	.	.	S	S						S	S			S														S					S	G	G	G	T	T
Template Predicted Secondary structure		.	.	.																								.	.	.	.	.
Template SS confidence
					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions