Job Description P60560 Confidence 100.00% Date Thu Jan 5 12:06:53 GMT 2012 Rank 21 Aligned Residues 268 % Identity 20% Template d1p0ka_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.90

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		G	F	K	D	V	L	I	R	P	K	R	S	T	L	K	S	R	S	D	V	E	L	E	R	Q	F	T	F	K	H	S	G	Q	S	W	S	G	V	P	I	I	A	A	N	M	D	T	V	G	.	.	.	.	.	.	.	T	F	S	M	A	S	A	L	A	S	F	D	I	L	T	A	V	H	K	H	.	.	.	.
Query Conservation																																																			.	.	.	.	.	.	.																					.	.	.	.
Alig confidence																												.	.	.	.	.																			.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		G	L	D	D	I	T	F	V	H	V	S	L	P	D	L	A	L	E	Q	V	D	I	S	T	K	I	.	.	.	.	.	G	E	L	S	S	S	S	P	I	F	I	N	A	M	T	G	G	G	G	K	L	T	Y	E	I	N	K	S	L	A	R	A	A	S	Q	A	G	I	P	L	A	V	G	S	Q	M	S	A	L
Template Known Secondary structure		S	G	G	G							S						G	G	G		B						.	.	.	.	.	T	T				S		S									S																				T									T	T	T	T
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N
Query Conservation
Alig confidence																																																																										.
Template Conservation																																																																										.
Template Sequence		K	D	P	S	E	R	L	S	Y	E	I	V	R	K	E	N	P	N	G	L	I	F	A	N	L	G	S	E	A	T	A	A	Q	A	K	E	A	V	E	M	I	G	A	N	A	L	Q	I	H	L	N	V	I	Q	E	I	F	S	G	A	L	K	R	I	E	Q	I	C	S	R	V	S	.	V	P	V	I	V	K	E
Template Known Secondary structure		T																S	S	S								T	T													T	T		S								T	T	T	T			T	T													S	.	S
Template Predicted Secondary structure																																																																										.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.
		159				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		V	.	.	.	V	T	G	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G
Query Conservation			.	.	.
Alig confidence			.	.	.																													.	.	.	.	.																				.	.
Template Conservation																																		.	.	.	.	.																				.	.
Template Sequence		V	G	F	G	M	S	K	A	S	A	G	K	L	Y	E	A	G	A	A	A	V	D	I	G	G	R	Q	I	S	F	F	N	.	.	.	.	.	S	W	G	I	S	T	A	A	S	L	A	E	I	R	S	E	F	P	A	.	.	S	T	M	I	A	S	G	G	L	Q	D	A	L	D	V	A	K	A	I	A	L	G
Template Known Secondary structure			S	S														T		S									G	G	G	G	T	.	.	.	.	.	T		S															T	T	.	.	S						S	S			S										T	T
Template Predicted Secondary structure																																		.	.	.	.	.																				.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.						.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	F	V	M	L	G	G	M	L	A	G	H	E	E	S	G	G	R	I	V	E	E	N	G	E	K	F	M	L	F	Y	G	M	S	S	E	S	A	M	K	R	H	V	G	G	V	A	E	Y	R	A	A	E	G	K	T	V	K	L	P	L	R	G	P	V	E	N	T	A	R	D	I	L	G	G	L	R	S	A
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	C	T	G	M	A	G	H	F	L	K	A	L	T	D	S	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	L	L	E	E	I	Q	L	I	L	E	E	L	K	L	I
Template Known Secondary structure			S																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.																																													.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	T	Y	V	G	A	S	R	L	K	E	L	T	K	R	T	T	F	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	T	V	L	G	A	R	T	I	A	D	L	Q	K	A	P	L	V	I
Template Known Secondary structure						T			B					T	T
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions