Job Description P60560 Confidence 30.27% Date Thu Jan 5 12:06:53 GMT 2012 Rank 489 Aligned Residues 115 % Identity 13% Template d1lt7a_ SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 2.15

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.																		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	M	C	E	E	L	I
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.																	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.																	.	.
Template Sequence		H	P	E	A	V	R	Q	L	H	R	E	F	L	R	A	G	S	N	V	M	Q	T	F	T	.	.	.	V	N	E	A	A	A	D	I	A	R	Q	V	A	D	E	G	.	.	D	A	L	V	A	G	G	V	S	Q	T	P	S	Y	L	S	A	K	S	E	T	E	V	K	K	V	F	L	Q	Q	L	E	V	F	M
Template Known Secondary structure																	T		S							.	.	.															T	T	.	.	T															T	T
Template Predicted Secondary structure																										.	.	.																	.	.
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.				.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.					.	.	.	.	.	.	.	240
Predicted Secondary structure																																																	.	.	.	.	.																	.	.	.	.
Query SS confidence																																																	.	.	.	.	.																	.	.	.	.
Query Sequence		L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	.	.	.	.	.	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	.	.	.	.	G	G	G	A	D	F	V	M
Query Conservation																																																	.	.	.	.	.																	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.																	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	K	N	V	D	F	L	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Y	F	E	H	V	E	E	A	V	W	A	V	E	T	L	I	A	S	G	K	P	V	A	A	T	M	A	I	G	P	E	G	D	L	H	G	V	P	P	G	E	A	A	V	R	L	V	K	A	G	A	S	I	I	G
Template Known Secondary structure			T	T		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S													G	G	G	S	S									B	T	T	B	S	T	T	S													T	T		S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.																.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		241
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		215

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions