Job Description P60560 Confidence 98.57% Date Thu Jan 5 12:06:53 GMT 2012 Rank 112 Aligned Residues 120 % Identity 21% Template d1icpa_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 1.90

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.																									.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Query Sequence		K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	T	.	.	.	.	.	.
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	A	A	R	N	A	I	E	A	G	F	D	G	V	E	I	H	G	A	H	G	Y	L	I	D	Q	F	M	K	D	Q	V	N	D	R	S	D	K	Y	G	G	S	L	E	N	R	C	R	F	A	L	E	I	V	E	A	V	A	N	E	I	G	S	D	R	V	G	I	R	I	S	P	F	A	H	Y	N	E	A
Template Known Secondary structure											T	T		S								T	T	S								T	T	T					S	T	T	S	S	S																					G	G	G							T	T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
											162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	G	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		G	D	T	N	P	T	A	L	G	L	Y	M	V	E	S	L	N	K	Y	D	L	A	Y	C	H	V	V	E	P	R	M	K	T	C	T	E	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	M	R	K	A	Y	K	G	T	F	I	V	A	G	G	Y	.	D	R	E	D	G	N	R	A	L
Template Known Secondary structure				S														G	G	G			S								S								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S						S	S		.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.																.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.
		233	.	.		.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		G	G	G	.	A	D	F	V	M	L	G	G	M	L	A	G
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		I	E	D	R	A	D	L	V	A	Y	G	R	L	F	I	S
Template Known Secondary structure			T	T	S		S					S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions