Return to main results Retrieve Phyre Job Id

Job DescriptionP60560
Confidence95.43%DateThu Jan 5 12:06:53 GMT 2012
Rank200Aligned Residues223
% Identity13%Templated1gvfa_
SCOP infoTIM beta/alpha-barrel Aldolase Class II FBP aldolase
Resolution1.45

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70...... ...80.........90.........100.........110.........120.........130...
Predicted Secondary structure 



......





















Query SS confidence 
















. . . . . .
























































Query Sequence  FSMASALASFDILTAVH. . . . . . KHYSVEEWQAFINNSSADVLKHVMVSTGTSDADFEKTKQILDLNPALNFVCIDVANG
Query Conservation    

 
 
  
  
   ......     
                                             
     
Alig confidence 
















......




























...
























Template Conservation   


 


   




                      
    








...
   
 
  

  









 
Template Sequence  QAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDH. . . HESLDDIRRKVHAGVRSAMIDGSHF
Template Known Secondary structure  T



TTS
TTS
B...

TT



TTS
Template Predicted Secondary structure 













...










Template SS confidence 















































































   32.......40.........50.........60.........70.........80... ......90.........100........
 
   134.....140.........150...... ...160 .........170 .........180.........190.........200...
Predicted Secondary structure 





....



.....
.






















Query SS confidence 






















. . . .



. . . . .









.
































Query Sequence  YSEHFVQFVAKAREAWPTKTICA. . . . GNVV. . . . . TGEMCEELIL. SGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVI
Query Conservation          
  
        

 ....
 
 .....
 
 
  
  .



 
 
 
 

           
 
    
 
Alig confidence 






















....



.....









.







......















.

Template Conservation 
 



  
  

  

  

 





 


   
 



  

  



 


......



 

 
   
 
 .  
Template Sequence  PFAENVKLVKSVVDFCHSQDCSVEAELGRLGSAFLTDPQEAKRFVELTGVDSLAV. . . . . . AIGTAHGLYSKTPKID. FQ
Template Known Secondary structure 
TT
S




SS



S......
SS

SS

SS




.
Template Predicted Secondary structure 













......














.
Template SS confidence 















































































   109110.........120.........130.........140.........150.........160... ......170......... 180.
 
   204.....210.........220..... ....230.........240.........250.........260.........270.........280..
Predicted Secondary structure 










.



























Query SS confidence 





















.
























































Query Sequence  ECADAAHGLGGMIVSDGGCTTP. GDVAKAFGGGADFVMLGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMKRHVGGV
Query Conservation            




 



 
. 

 







 
 


 
    

 
              
 

  
        
Alig confidence 





















.











































.............
Template Conservation   
  
     









   
    

  

 



 
 
  
                
    .............
Template Sequence  RLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENPQGNDPRYY. . . . . . . . . . . . .
Template Known Secondary structure 

S



TT

TT

TT


.............
Template Predicted Secondary structure 



















.............
Template SS confidence 















































































   193......200.........210.........220.........230.........240.........250.........
 
   283......290.........300.........310.........320...
Predicted Secondary structure 












Query SS confidence 








































Query Sequence  AEYRAAEGKTVKLPLRGPVENTARDILGGLRSACTYVGASR
Query Conservation        


         
   
     

   
   
   
Alig confidence  ..................






















Template Conservation  ..................         
 
   
  


 
Template Sequence  . . . . . . . . . . . . . . . . . . MRVGMDAMKEVVRNKINVCGSAN
Template Known Secondary structure  ..................T
TT
Template Predicted Secondary structure  ..................



Template SS confidence 








































   260.........270.........280..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions