Job Description P60560 Confidence 99.87% Date Thu Jan 5 12:06:53 GMT 2012 Rank 50 Aligned Residues 228 % Identity 11% Template d1f76a_ SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.50

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		11	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure										.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	K	D	V	L	I	R	P	.	K	R	S	T	L	K	S	R	S	D	V	E	L	E	R	Q	F	T	F	K	H	S	G	Q	S	W	S	G	V	P	I	I	A	A	N	M	D	T	V	G	T	F	S	M	A	S	A	L	A	S	F	D	I	L	T	A	V	H	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation										.																																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.		.	.															.	.	.	.	.														.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.															.	.	.	.	.														.
Template Sequence		L	R	R	I	T	G	T	P	F	E	.	.	A	L	V	R	Q	K	V	P	A	K	P	V	N	C	.	.	.	.	.	X	G	L	T	F	K	N	P	L	G	L	A	A	.	G	L	D	K	D	G	E	C	I	D	A	L	G	A	X	G	F	G	S	I	E	I	G	T	V	T	P	R	P	Q	P	G	N	D	K
Template Known Secondary structure						T	T	S	G	G	G	.	.	G	G	T												.	.	.	.	.	T	T				S	S	S					T	.	T	S	S	T	T										T	T		S									S	S		B			S		S
Template Predicted Secondary structure												.	.															.	.	.	.	.														.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
																				77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	K	T	K	Q	I	L	D	L	.	.	.	.	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.
Template Conservation
Template Sequence		P	R	L	F	R	L	V	D	A	E	G	L	I	N	R	X	G	F	N	N	L	G	V	D	N	L	V	E	N	V	K	K	A	H	Y	D	G	V	L	G	I	N	I	G	K	N	K	D	T	P	V	E	Q	G	K	D	D	Y	L	I	C	X	E	K	I	Y	A	Y	A	G	Y	I	A	I	N	I	S	S	P	N
Template Known Secondary structure								T	T	T	T										B																	S										T	T	S		G	G	G	T												G	G	G		S									S	S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
											135	.	.	.	.	140	.	.	.	.	.	.	.	.									.	150	.	.	.	.	.	.	.							.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure		.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.										.	.	.	.	.	.																								.
Query SS confidence		.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.										.	.	.	.	.	.																								.
Query Sequence		.	.	.	.	.	.	.	.	.	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	.	.	.	.	.	.	.	.	W	P	T	K	T	I	C	A	G	.	.	.	.	.	.	N	V	V	T	G	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	.	G	P	G	S	V	C	T	T	R	V
Query Conservation		.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.										.	.	.	.	.	.																								.
Alig confidence		.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.										.	.	.	.	.	.																								.
Template Conservation
Template Sequence		T	P	G	L	R	T	L	Q	Y	G	E	A	L	D	D	L	L	T	A	I	K	N	K	Q	N	D	L	Q	A	X	H	H	K	Y	V	P	I	A	V	K	I	A	P	D	L	S	E	E	E	L	I	Q	V	A	D	S	L	V	R	H	N	I	D	G	V	I	A	T	N	T	T	L	D	R	S	L	V	Q	G	X
Template Known Secondary structure		S	T	T	G	G	G	G	G	S																							T	S										S																	T	T		S								B				T	T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		191	.	.	.	.	.	.											.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.
Query Sequence		K	T	G	V	G	Y	P	.	.	.	.	.	.	.	.	.	.	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A	D	F	V	M	L	G	G	M	L	A	G
Query Conservation									.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																		.
Template Sequence		K	N	C	D	Q	T	G	G	L	S	G	R	P	L	Q	L	K	S	T	E	I	I	R	R	L	S	L	E	L	N	G	R	.	L	P	I	I	G	V	G	G	I	D	S	V	I	A	A	R	E	K	I	A	A	G	A	S	L	V	Q	I	Y	S	G	F	I	F
Template Known Secondary structure		T	T	T	T		S	S					G	G	G																T	T	S	.	S						S	S			S											T		S					S
Template Predicted Secondary structure																																		.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions