Return to main results Retrieve Phyre Job Id

Job DescriptionP60560
Confidence96.69%DateThu Jan 5 12:06:53 GMT 2012
Rank182Aligned Residues132
% Identity13%Templated1e0ta2
SCOP infoTIM beta/alpha-barrel Phosphoenolpyruvate/pyruvate domain Pyruvate kinase
Resolution1.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   100.........110.........120.........130.........140......... 150.........160 .........
Predicted Secondary structure 














....







......
Query SS confidence 

















































. . . .










. . . . . .








Query Sequence  MVSTGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHFVQFVAKAREAW. . . . PTKTICAGNVV. . . . . . TGEMCEELI
Query Conservation                              
             
  
    ....    

 
 
 ......
 
 
  
 
Alig confidence 

















































....










......








Template Conservation 


 





 
 
 
  
  

 
 



 


        
  

 
    
  
 
  

 

  

 
  

   
Template Sequence  KIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPALAEKDKQDLIFGC
Template Known Secondary structure 

GGG
STTTSS
T







S
Template Predicted Secondary structure 





























Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   170.........180.........190.........200.........210.........220.........230.........240...
Predicted Secondary structure 






































Query SS confidence 









































































Query Sequence  LSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVSDGGCTTPGDVAKAFGGGADFVMLGG
Query Conservation   



 
 
 
 

           
 
    
           




 



 
 

 







 
 


Alig confidence 








......







......












































Template Conservation    


 
 
......
 
 



......
  

  
         






  

 





   






Template Sequence  EQGVDFVAA. . . . . . SFIRKRSD. . . . . . VIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVAR
Template Known Secondary structure  T
S......SS

S......TTT
TT

STSS
Template Predicted Secondary structure 



......




......











Template SS confidence 









































































   183......190. ........ 200.........210.........220.........230.........240....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions