Job Description P60560 Confidence 30.84% Date Thu Jan 5 12:06:53 GMT 2012 Rank 485 Aligned Residues 168 % Identity 12% Template c3si9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from bartonella2 henselae Resolution 2.10 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.								.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																		.	.	.	.	.	.	.																			.	.
Query SS confidence																		.	.	.	.	.	.	.																			.	.
Query Sequence		F	S	M	A	S	A	L	A	S	F	D	I	L	T	A	V	.	.	.	.	.	.	.	H	K	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	.	.	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V
Query Conservation																		.	.	.	.	.	.	.																			.	.
Alig confidence																		.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		C	N	F	V	E	W	Q	I	T	Q	G	I	N	G	V	S	P	V	G	T	T	G	E	S	P	T	L	T	H	E	E	H	K	R	I	I	E	L	C	V	E	Q	V	A	K	R	V	P	V	V	A	G	A	G	S	N	S	T	S	E	A	V	E	L	A	K	H	A	E	K	A	G	A	D	A	V	L	V	V	T
Template Known Secondary structure											T	T		S					S	S	T	T	T	T	G	G	G																		T	T	S	S		B							S	S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		131	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.								.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure					.	.	.																								.	.	.	.	.	.	.
Query SS confidence					.	.	.																								.	.	.	.	.	.	.
Query Sequence		A	N	G	.	.	.	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	.	.	.	.	.	.	.	G	N	V	V	T	G	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S
Query Conservation					.	.	.																								.	.	.	.	.	.	.
Alig confidence					.	.	.																		.						.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Y	Y	N	R	P	N	Q	R	G	L	Y	T	H	F	S	S	I	A	K	A	I	S	.	I	P	I	I	I	Y	N	I	P	S	R	S	V	I	D	M	A	V	E	T	M	R	D	L	C	R	D	F	K	N	I	I	G	V	K	D	A	T	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E
Template Known Secondary structure				S	S																			S	.	S												S	S															T	T								S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																									.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.															.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A	D	F	V	M	L	G	G	M	L	A	G
Query Conservation
Alig confidence											.												.	.	.	.
Template Conservation											.												.	.	.	.
Template Sequence		R	A	S	E	Q	R	E	K	C	.	G	K	D	F	V	Q	L	S	G	D	D	.	.	.	.	C	T	A	L	G	F	N	A	H	G	G	V	G	C	I	S	V	S	S	N	V	A
Template Known Secondary structure											.		T	T	S					S		T	.	.	.	.	T	T								T							S	G	G	G	T
Template Predicted Secondary structure											.												.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions