Job Description P60560 Confidence 47.37% Date Thu Jan 5 12:06:53 GMT 2012 Rank 405 Aligned Residues 149 % Identity 16% Template c3rr1B_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative d-galactonate dehydratase; PDBTitle: crystal structure of enolase prk14017 (target efi-500653) from2 ralstonia pickettii 12j Resolution 1.95 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.											.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.																																	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.																																	.	.	.
Query Sequence		L	T	A	V	H	K	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	.	.	.	.	.	.	.	.	.	.	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	.	.	.
Query Conservation																																					.	.	.	.	.	.	.	.	.	.																																	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template Conservation
Template Sequence		T	Y	S	W	V	G	G	D	R	P	A	D	V	I	A	G	M	K	A	L	Q	A	G	G	F	D	H	F	K	L	N	G	C	E	E	M	G	I	I	D	T	S	R	A	V	D	A	A	V	A	R	V	A	E	I	R	S	A	F	G	N	T	V	E	F	G	L	D	F	H	G	R	V	S	A	P	M	A	K	V
Template Known Secondary structure									S	S													T	T	T								S	S	S	S	S	S		B		S																	T	T	G	G	G	S							T	T		B
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
																							139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.																.							.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.																.							.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	.	N	V	V	T	G	E	M	C	E	E	L	I	L	S	G	.	A	D	I	V	K	V	.	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.																.							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.							.																.							.							.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	K	E	L	E	P	Y	R	P	L	F	I	E	E	P	V	L	A	E	Q	A	E	T	Y	A	R	L	A	A	H	T	H	.	L	P	I	A	A	G	E	R	M	F	S	R	F	D	F	K	R	V	L	E	A	G	G	V	S	I	L	Q	P	D	L	S	H	A	G	G	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							G	G	G			S						S				S	S	S							T	T		S	.	S						T	T			S														S					B	T	T	T	T	T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A
Query Conservation
Alig confidence		.	.	.	.																					.
Template Conservation		.	.	.	.																					.
Template Sequence		.	.	.	.	I	T	E	C	V	K	I	A	A	M	A	E	A	Y	D	V	A	L	A	P	.	H	C	P	L	G	P	I	A	L	A	A	C	L	H	V	D	F
Template Known Secondary structure		.	.	.	.													T	T	T						.	B			S
Template Predicted Secondary structure		.	.	.	.																					.
Template SS confidence
						265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions