Job Description P60560 Confidence 58.33% Date Thu Jan 5 12:06:53 GMT 2012 Rank 371 Aligned Residues 142 % Identity 16% Template c3rcyC_ PDB info PDB header:isomerase Chain: C: PDB Molecule:mandelate racemase/muconate lactonizing enzyme-like PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme-2 like protein from roseovarius sp. tm1035 Resolution 1.99 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.															.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Query Sequence		S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	.	.	.	.	.	.	.
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	D	M	A	A	E	S	A	A	D	C	V	A	R	G	Y	T	A	V	K	F	D	P	A	G	P	Y	T	L	R	G	G	H	M	P	A	M	T	D	I	S	L	S	V	E	F	C	R	K	I	R	A	A	V	G	D	K	A	D	L	L	F	G	T	H	G	Q	F	T	T	A	G	A	I	R	L	G	Q	A
Template Known Secondary structure																T	T		S							S				B	T	T			B																						T	T	S	S								S		B
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
																			139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.													.							.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.													.							.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	.	T	G	E	M	C	E	E	L	I	L	S	G	.	A	D	I	V	K	V	.	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.													.							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.										.													.							.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	P	Y	S	P	L	W	Y	E	E	P	V	P	P	D	N	V	G	A	M	A	Q	V	A	R	A	V	R	.	I	P	V	A	T	G	E	R	L	T	T	K	A	E	F	A	P	V	L	R	E	G	A	A	A	I	L	Q	P	A	L	G	R	A	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			G	G	G			S						S		T	T												S	S	.	S						T	T			S										T	T			S										T		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A	D
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		I	W	E	M	K	K	V	A	A	M	A	E	V	Y	N	A	Q	.	M	A	P	H	L	Y	A	G	P	V	E	W	A	A	N	V	H	F	A	A	S
Template Known Secondary structure														T	T	T			.						S	S														T
Template Predicted Secondary structure																			.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions