Job Description P60560 Confidence 96.98% Date Thu Jan 5 12:06:53 GMT 2012 Rank 177 Aligned Residues 131 % Identity 18% Template c3qyqC_ PDB info PDB header:lyase Chain: C: PDB Molecule:deoxyribose-phosphate aldolase, putative; PDBTitle: 1.8 angstrom resolution crystal structure of a putative deoxyribose-2 phosphate aldolase from toxoplasma gondii me49 Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.									.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.											.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Query Sequence		G	T	S	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y	.	.	.	.	.	.	.	.	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	T	.	.	.	.	.	.	.	.	.	.	G	E	M	C
Query Conservation																																	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.																	.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.
Template Sequence		G	T	G	T	P	D	T	V	S	L	E	A	V	G	A	L	K	D	G	A	D	E	I	E	C	L	I	D	W	R	R	M	N	E	N	V	A	D	G	E	S	R	I	R	L	L	V	S	E	V	K	K	V	V	G	.	.	P	K	T	L	K	V	V	L	S	G	G	E	L	Q	G	G	D	I	I	S	R	A	A
Template Known Secondary structure																			T	T		S																																		T	.	.	T	S								T	T	T	S	S	S
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210																.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	A	L	E	G	G	A	D	F	L	Q	T	S	S	G	L	G	A	T	H	A	T	.	.	.	.	.	.	.	.	.	.	M	F	T	V	H	L	I	S	I	A	L	R	E	Y	M	V	R	E	N	E	R	I	R	V	E	G	I	N	R	C	I	G	I	K	I	E	V	G	D	V	H	M	A	E	T	A	D
Template Known Secondary structure								T		S				S			S	S	S	S					.	.	.	.	.	.	.	.	.	.																										T													T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.											.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		231	.						.	.	.	.	.								.	.	240	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.						.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.						.	.	.	.	.	.	.
Query Sequence		A	F	.	.	.	.	.	G	G	G	A	D	.	.	.	.	.	.	.	F	V	M	L	G	G	M	L	A
Query Conservation				.	.	.	.	.						.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.						.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	L	M	Q	M	I	F	E	N	G	P	R	S	I	V	R	D	K	F	R	V	G	G	G	F	N	L	L
Template Known Secondary structure												G	G	G		S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions