Job Description P60560 Confidence 82.73% Date Thu Jan 5 12:06:53 GMT 2012 Rank 295 Aligned Residues 177 % Identity 14% Template c3qfwB_ PDB info PDB header:lyase Chain: B: PDB Molecule:ribulose-1,5-bisphosphate carboxylase/oxygenase large PDBTitle: crystal structure of rubisco-like protein from rhodopseudomonas2 palustris Resolution 1.79 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.									.	.	.	.	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.
Predicted Secondary structure																					.	.								.	.	.	.	.	.	.	.												.	.	.	.																										.
Query SS confidence																					.	.								.	.	.	.	.	.	.	.												.	.	.	.																										.
Query Sequence		I	A	A	N	M	D	T	V	G	T	F	S	M	A	S	A	L	A	S	.	.	F	D	I	L	T	A	V	.	.	.	.	.	.	.	.	H	K	H	Y	S	V	E	E	W	Q	A	.	.	.	.	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	.	K	T	K
Query Conservation																					.	.								.	.	.	.	.	.	.	.												.	.	.	.																										.
Alig confidence							.														.	.								.	.	.	.	.	.	.	.												.	.	.	.																										.
Template Conservation							.
Template Sequence		A	L	K	P	Q	.	G	L	S	P	A	A	L	A	S	I	A	H	Q	L	A	L	G	G	V	D	L	I	K	D	D	H	G	L	A	D	Q	A	F	S	P	F	A	E	R	A	A	A	V	G	K	A	V	R	E	A	N	A	A	R	G	G	R	T	L	Y	A	P	N	I	S	G	T	L	D	D	M	R	R	Q
Template Known Secondary structure						T	.	T	S															T	T		S						T	T		S	S		T	T	S																					T								B			S	S
Template Predicted Secondary structure							.
Template SS confidence
		137	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.									.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.
Query Sequence		Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	T	G	.	.	.	.	.	.	.	.	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C
Query Conservation																																																		.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		L	G	V	I	R	D	E	G	I	G	A	V	L	V	A	P	.	.	.	.	M	I	V	G	V	S	N	F	H	A	I	V	K	E	A	A	G	L	V	V	V	A	H	P	A	M	A	G	A	A	K	I	A	A	P	L	L	L	G	R	L	F	R	L	F	G	A	D	A	T	V	F	P	N	Y	G	G	R	F	A
Template Known Secondary structure									T									.	.	.	.													T	T		T	T								T	T	T	T	S	S		B							T							T		S							T	T	S	S	S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.					.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																											.	.	.	.	.
Query SS confidence																											.	.	.	.	.
Query Sequence		T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	.	.	.	.	.	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A	D	F	V	M	L
Query Conservation																											.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	S	.	.	.	.	.	.	.	.	.	.	T	A	S	C	L	A	L	A	Q	A	A	R	D	P	F	G	K	L	N	A	C	I	P	T	P	A	G	G	I	M	L	Q	R	V	N	E	L	L	R	F	Y	G	Q	D	V	M	L	L
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.													S			T	T										S	S			T	T	T										S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		292	.											.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions