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Job DescriptionP60560
Confidence98.09%DateThu Jan 5 12:06:53 GMT 2012
Rank144Aligned Residues172
% Identity17%Templatec3qc3B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:d-ribulose-5-phosphate-3-epimerase; PDBTitle: crystal structure of a d-ribulose-5-phosphate-3-epimerase (np_954699)2 from homo sapiens at 2.20 a resolution
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  QAFINNSSADVLKHVMVSTGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVVTGEM
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Template Sequence  HPVVESLRKQLGQDPFFDXHXXVSKPEQWVKPXA. VAGANQYTFHLEATE. . NPGALIKDIRENGXKVGLAIKPGTSVEY
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SSS

S
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SGGG
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TT

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GGG
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   51........60.........70.........80.... .....90......... 100.........110.........120.......
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  CEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVSDGGCTTPGDVAKAFGGGADFVMLGGM
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Template Sequence  LAPWAN. QIDXALV. . . . XTVEPGFGGQKFXEDXXPKVHWLRTQF. . PSLDIEVDGGV. GPDTVHKCAEAGANXIVSGSA
Template Known Secondary structure  GTTTGG.GSS....SS
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GGG
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   128.130... ......140 .........150.........160....... ..170........ .180.........190.........
 
   245....250.........260.........270.........280.........290.........300.........310.......
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Query Sequence  LAGHEESGGRIVEENGEKFMLFYGMSSESAMKRHVGGVAEYRAAEGKTVKLPLRGPVENTARDILGGLRSACT
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Template Sequence  IXRSE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DPRSVINLLRNVCSEAAQ
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   200.... .....210.........220..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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