Job Description P60560 Confidence 41.34% Date Thu Jan 5 12:06:53 GMT 2012 Rank 427 Aligned Residues 175 % Identity 15% Template c3pueA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of the complex of dhydrodipicolinate synthase from2 acinetobacter baumannii with lysine at 2.6a resolution Resolution 2.60 Å

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		47	.	.	50	.	.	.	.	.							.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.								.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure											.	.	.	.	.	.																					.	.	.	.	.	.	.																						.	.
Query SS confidence											.	.	.	.	.	.																					.	.	.	.	.	.	.																						.	.
Query Sequence		V	P	I	I	A	A	N	M	D	.	.	.	.	.	.	T	V	G	T	F	S	M	A	S	A	L	A	S	F	D	I	L	T	A	V	.	.	.	.	.	.	.	H	K	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	.	.	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E
Query Conservation											.	.	.	.	.	.																					.	.	.	.	.	.	.																						.	.
Alig confidence											.	.	.	.	.	.																					.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		I	V	A	I	V	T	P	M	L	K	D	G	G	V	D	W	K	S	L	E	K	L	V	E	W	H	I	E	Q	G	T	N	S	I	V	A	V	G	T	T	G	E	A	S	T	L	S	M	E	E	H	T	Q	V	I	K	E	I	I	R	V	A	N	K	R	I	P	I	I	A	G	T	G	A	N	S	T	R	E	A
Template Known Secondary structure									B		T	T	S		B																T							S	S	G	G	G	T	G	G	G	S																		S	S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.								.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180
Predicted Secondary structure																							.	.	.																									.	.	.	.	.	.	.																.
Query SS confidence																							.	.	.																									.	.	.	.	.	.	.																.
Query Sequence		K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	.	.	.	G	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	.	.	.	.	.	.	.	G	N	V	V	T	G	E	M	C	E	E	L	I	L	S	.	G	A	D	I	V	K	V	G	I
Query Conservation																							.	.	.																									.	.	.	.	.	.	.																.
Alig confidence																							.	.	.																			.						.	.	.	.	.	.	.																.								.	.
Template Conservation																																												.																																				.	.
Template Sequence		I	E	L	T	K	A	A	K	D	L	G	A	D	A	A	L	L	V	T	P	Y	Y	N	K	P	T	Q	E	G	L	Y	Q	H	Y	K	A	I	A	E	A	V	E	.	L	P	L	I	L	Y	N	V	P	G	R	T	G	V	D	L	S	N	D	T	A	V	R	L	A	E	I	P	N	I	V	G	I	K	D	.	.
Template Known Secondary structure											T	T		S									S	S																				.	S												S												T	T	S	T	T							.	.
Template Predicted Secondary structure																																												.																																				.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A	D	F	V	M	L	G	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.									.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.									.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	G	D	V	P	R	G	K	A	L	I	D	A	L	N	G	.	K	M	A	V	Y	S	G	D	.	.	.	.	D	E	T	A	W	E	L	M	L	L	G	A	D	G	N	I	S	V	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.		S													S	S	T	.	T	S							.	.	.	.										T	T							S	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.									.	.	.	.
Template SS confidence
																163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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