Job Description P60560 Confidence 96.50% Date Thu Jan 5 12:06:53 GMT 2012 Rank 185 Aligned Residues 190 % Identity 12% Template c3pg8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:phospho-2-dehydro-3-deoxyheptonate aldolase; PDBTitle: truncated form of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase2 from thermotoga maritima Resolution 2.00 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																		.	.	.	.																					.
Query SS confidence																																		.	.	.	.																					.
Query Sequence		E	L	E	R	Q	F	T	F	K	H	S	G	Q	S	W	S	G	V	P	I	I	A	A	N	M	D	T	V	G	T	F	S	.	.	.	.	M	A	S	A	L	A	S	F	D	I	L	T	A	V	H	K	H	Y	S	V	.	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G
Query Conservation																																		.	.	.	.																					.
Alig confidence																	.	.	.									.						.	.	.	.																					.																				.	.	.	.
Template Conservation																	.	.	.									.																																																		.	.	.	.
Template Sequence		D	T	V	I	D	L	G	D	V	K	I	G	N	G	Y	.	.	.	F	T	I	I	A	G	P	S	.	V	E	G	R	E	M	L	M	E	T	A	H	F	L	S	E	L	G	V	K	V	L	R	G	G	A	Y	K	L	G	E	K	G	L	E	Y	L	R	E	A	A	D	K	Y	G	M	Y	V	V	.	.	.	.
Template Known Secondary structure								S	S				S	T	T		.	.	.									.																	T	T											.															T	T					.	.	.	.
Template Predicted Secondary structure																	.	.	.									.																																																		.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.					.	.	.	.
Query SS confidence																																																										.	.					.	.	.	.
Query Sequence		T	S	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	.	.	T	G	E	M	.	.	.	.	C	E	E	L	I	L	S	G	A	D	I	V	K	V
Query Conservation																																																										.	.					.	.	.	.
Alig confidence		.	.																.																							.	.	.	.	.												.	.					.	.	.	.
Template Conservation		.	.																.																							.	.	.	.	.
Template Sequence		.	.	T	E	A	L	G	E	D	D	L	P	K	V	A	E	Y	.	A	D	I	I	Q	I	G	A	R	N	A	Q	N	F	R	L	L	S	K	A	G	S	.	.	.	.	.	Y	N	K	P	V	L	L	K	R	G	F	M	N	T	I	E	E	F	L	L	S	A	E	Y	I	A	N	S	G	N	T	K	I	I	L
Template Known Secondary structure		.	.					S	G	G	G								.		S						G	G	G	T	T									G	G	.	.	.	.	.	G		S								T	T																T	T
Template Predicted Secondary structure		.	.																.																							.	.	.	.	.
Template SS confidence
				163	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.						200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.
Query Sequence		G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	.	.	.	.	.	.	G	D	V	A	K	A	F	G	G	G	A	D	F	V	M	L
Query Conservation																																																	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.
Template Sequence		C	E	R	G	I	R	T	F	E	K	A	T	R	N	T	L	D	I	S	A	V	P	I	I	R	K	E	.	.	.	.	.	.	S	H	L	P	I	L	V	D	P	S	H	S	G	G	R	R	D	L	V	I	P	L	S	R	A	A	I	A	V	G	A	H	G	I	I	V
Template Known Secondary structure						B			S		S	S	S	S	S	B			T	T									.	.	.	.	.	.	B	S	S						T	T	T	T	T			G	G	G												T		S
Template Predicted Secondary structure																													.	.	.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.							.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions