|   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
|
|
|
. | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
Query Sequence |   |
F | S | M | A | S | A | L | A | S | F | D | I | L | T | A | V | H | K | H | Y | S | V | E | E | W | Q | A | F | I | N | N | S | S | A | D | V | L | K | H | V | M | V | S | T | G | T | S | D | A | D | F | E | K | T | K | Q | I | L | D | L | N | P | A | L | N | F | V | C | I | D | V | A | . |
. |
. |
. |
. |
N | G | Y |
Query Conservation |   |
  |   |
|
|   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|   |   |   |   |   |   |
|
|
|
|   |
|   |   |
|   |   |
|   |   |   |
|   |
|
|   |
|
|
|   |
|
|
|
|
|
|   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|
|   |
|
|
|   |
|
|
|   |   |   |
|   |   |
|   |
Template Sequence |   |
D | V | L | C | A | E | A | K | E | Y | G | F | A | T | V | C | V | R | P | D | Y | V | S | R | A | V | Q | Y | L | Q | G | T | Q | V | G | V | T | C | V | I | G | F | H | E | G | T | Y | S | T | D | Q | K | V | S | E | A | K | R | A | M | Q | N | G | A | S | E | L | D | M | V | M | N | Y | P | W | L | S | E | K | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  | T | T | T | S | S |
|  |  |  |  |  |  | S | T | T | T | S |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
|
|  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
  |
  |   |
135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
|
. | . | . | 160 | . | . | . | . | |
|
|
|
. | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . |
|
|
|
|
|  |  |  | . | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | H | F | V | Q | F | V | A | K | A | R | E | A | W | P | T | K | T | I | C | A | . |
. |
. |
G | N | V | V | T | G | E | M | . |
. |
. |
. |
C | E | E | L | I | L | S | G | A | D | I | V | K | V | G | I | G | P | G | S | V | C | T | T | R | V | K | T | G | V | G | Y | P | Q | L | S | A | V | I | E | C | A | D |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   | . | . | . |
|   |
|   |
|   |
|   | . | . | . | . |
|   |   |
|   |   |
|
|
|
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|
| . | . | . | . | . | . | . | . | . | . |   |
|   |
|   |
|
|   |   |
Template Sequence |   |
Y | T | D | V | F | Q | D | I | R | A | V | R | L | A | A | K | D | A | I | L | K | V | I | L | E | T | S | Q | L | T | A | D | E | I | I | A | G | C | V | L | S | S | L | A | G | A | D | Y | V | K | T | S | T | G | F | N | G | P | G | A | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | E | N | V | S | L | M | S | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |  |  |  |  |  |
|
| G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |
|
|
| S | S | S | S |
|
|
|
| . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
136 | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | 200 | . | . | . | . | . |
  |
  |   |
208 | . | 210 | |
|
. | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
Predicted Secondary structure |   |
 |  |
| . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | H | . |
. |
G | L | G | G | M | I | V | S | D | G | G | C | T | T | P | G | D | V | A | K | A | F | G | G | G | A | D | F | V | M | L | G | G | M | L | A | G | H | E | E |
Query Conservation |   |
  |   |   | . | . |   |   |   |
|
|
|
|
|   |
|
|
|
|   |
|   |
|
|   |
|
|
|
|
|
|
|
|   |
|   |
|
|
|   |
|   |   |   |   |
|
Alig confidence |   |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |
|
|
|   |
|
|
|
|
|
|   |   |   |
|   |   |
|
Template Sequence |   |
V | C | D | S | L | Q | S | E | T | R | V | K | A | S | G | G | I | R | T | I | E | D | C | V | K | M | V | R | A | G | A | E | R | L | G | A | S | A | G | V | K | I | V | N | E |
Template Known Secondary structure |   |
 |  |  |  | S | S | S |
|
|  |  |  |  |  | S | S |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
  |