Return to main results Retrieve Phyre Job Id

Job DescriptionP60560
Confidence77.37%DateThu Jan 5 12:06:53 GMT 2012
Rank314Aligned Residues64
% Identity22%Templatec3noyA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: crystal structure of ispg (gcpe)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   161........170.........180.........190.........200.........210.........220.........230.........240
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  TGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVSDGGCTTPGDVAKAFGGGADFVM
Query Conservation 
 
 
  
  



 
 
 
 

           
 
    
           




 



 
 

 







 
 
Alig confidence 

















................



























.
















Template Conservation   
 

  
  

 




................ 
     
  
  
     








.    
  
      


Template Sequence  TLNQIKRLYEAGCEIVRV. . . . . . . . . . . . . . . . AVPHKEDVEALEEIVKKSPMPVIADIHF. APSYAFLSMEKGVHGIR
Template Known Secondary structure  TT

................

S
SS


S.
TT
S
Template Predicted Secondary structure 



................









.



Template SS confidence 















































































   3940.........50...... ...60.........70.........80.... .....90.........100.
 
   241
Predicted Secondary structure 
Query SS confidence 
Query Sequence  L
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  I
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   102
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions