Job Description P60560 Confidence 97.18% Date Thu Jan 5 12:06:53 GMT 2012 Rank 170 Aligned Residues 171 % Identity 11% Template c3nm3D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thiamine biosynthetic bifunctional enzyme; PDBTitle: the crystal structure of candida glabrata thi6, a bifunctional enzyme2 involved in thiamin biosyhthesis of eukaryotes Resolution 3.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																				.	.																.	.	.
Query SS confidence																				.	.																.	.	.
Query Sequence		F	S	M	A	S	A	L	A	S	F	D	I	L	T	A	V	H	K	.	.	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	.	.	.	A	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y
Query Conservation																				.	.																.	.	.
Alig confidence																				.	.																.	.	.											.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template Sequence		Y	G	Q	V	E	A	G	L	Q	N	G	V	T	L	V	Q	I	R	E	K	D	A	D	T	K	F	F	I	E	E	A	L	Q	I	K	E	L	C	H	A	H	N	V	P	L	I	I	N	.	.	.	.	.	.	.	.	.	.	D	R	I	D	V	A	M	A	I	G	A	D	G	I	H	V	.	.	.	.	G	Q
Template Known Secondary structure										S	S										S	S	S		T	T																T	T							.	.	.	.	.	.	.	.	.	.	S									T		S					.	.	.	.		T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.																	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.											.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	T	G	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	.	.	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L
Query Conservation																																																													.	.
Alig confidence																																														.	.	.	.												.	.
Template Conservation																																														.	.	.	.
Template Sequence		D	D	M	P	I	P	M	I	R	K	L	V	G	P	D	M	V	I	G	W	S	V	G	F	P	E	E	V	D	E	L	S	K	M	G	P	D	M	V	D	Y	I	G	V	.	.	.	.	G	T	L	F	P	T	L	T	K	K	N	K	K	M	G	T	A	G	A	I	R	V	L	D	A	L	E	R	N	N	A	H
Template Known Secondary structure		T	S	S											T	T	S								S	T								T	T		T	T	S							.	.	.	.				S			S	S																					T	T		T
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.					.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.									.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.
Query Sequence		G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	.	.	.	.	.	.	.	.	G	G	G	A	D	F	V	M	L	G	G	M	L	A	G	H	E
Query Conservation																						.	.	.	.	.	.	.	.
Alig confidence												.										.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		W	C	R	T	V	G	I	G	G	L	.	H	P	D	N	I	E	R	V	L	Y	Q	C	V	S	S	N	G	K	R	S	L	D	G	I	C	V	V	S	D	I	I	A	S	L
Template Known Secondary structure		T							S	S		.		T	T	T									B		T	T	S			B		S					S	T	T	T	T	T		T
Template Predicted Secondary structure												.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions