Job Description P60560 Confidence 82.29% Date Thu Jan 5 12:06:53 GMT 2012 Rank 298 Aligned Residues 174 % Identity 13% Template c3na8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of a putative dihydrodipicolinate synthetase from2 pseudomonas aeruginosa Resolution 1.85 Å

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		47	.	.	50	.	.	.	.	.							.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.								.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure											.	.	.	.	.	.																					.	.	.	.	.	.	.																					.	.
Query SS confidence											.	.	.	.	.	.																					.	.	.	.	.	.	.																					.	.
Query Sequence		V	P	I	I	A	A	N	M	D	.	.	.	.	.	.	T	V	G	T	F	S	M	A	S	A	L	A	S	F	D	I	L	T	A	V	.	.	.	.	.	.	.	H	K	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	.	.	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E
Query Conservation											.	.	.	.	.	.																					.	.	.	.	.	.	.																					.	.
Alig confidence											.	.	.	.	.	.																					.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		I	G	Y	T	I	T	P	F	A	A	D	G	G	L	D	L	P	A	L	G	R	S	I	E	R	L	I	D	G	G	V	H	A	I	A	P	L	G	S	T	G	E	G	A	Y	L	S	D	P	E	W	D	E	V	V	D	F	T	L	K	T	V	A	H	R	V	P	T	I	V	S	V	S	D	L	T	T	A	K	T
Template Known Secondary structure									B		T	T	S	S	B															T	T		S					S	S	G	G	G	T	G	G	G	S																	T	T	S	S		B							S	S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.								.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.																									.	.	.	.	.	.	.															.	.
Query SS confidence																							.	.	.																									.	.	.	.	.	.	.															.	.
Query Sequence		K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	.	.	.	G	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	.	.	.	.	.	.	.	G	N	V	V	T	G	E	M	C	E	E	L	I	L	.	.	S	G	A	D	I	V	K	V	G
Query Conservation																							.	.	.																									.	.	.	.	.	.	.															.	.
Alig confidence																							.	.	.																			.						.	.	.	.	.	.	.															.	.									.
Template Conservation																																												.																																					.
Template Sequence		V	R	R	A	Q	F	A	E	S	L	G	A	E	A	V	X	V	L	P	I	S	Y	W	K	L	N	E	A	E	V	F	Q	H	Y	R	A	V	G	E	A	I	G	.	V	P	V	X	L	Y	N	N	P	G	T	S	G	I	D	X	S	V	E	L	I	L	R	I	V	R	E	V	D	N	V	T	X	V	K	E	.
Template Known Secondary structure											T	T		S									S	S																			S	.	S												S															S	T	T							.
Template Predicted Secondary structure																																												.																																					.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A	D	F	V	M	L	G	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.										.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.										.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	G	D	I	Q	R	X	H	K	L	R	L	L	G	E	G	R	.	V	P	F	Y	N	G	N	P	L	.	.	.	.	.	A	L	E	A	F	V	A	G	A	K	G	W	C	S	A	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S												T	T	T		.	S							T	T	.	.	.	.	.								T		S					S	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.										.	.	.	.	.
Template SS confidence
																	187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.						.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions