Return to main results Retrieve Phyre Job Id

Job DescriptionP60560
Confidence70.90%DateThu Jan 5 12:06:53 GMT 2012
Rank335Aligned Residues151
% Identity14%Templatec3my9A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of a muconate cycloisomerase from azorhizobium2 caulinodans
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.........100....... ..110.........120.........130...
Predicted Secondary structure 












..









................
Query SS confidence 



































. .

























. . . . . . . . . . . . . . . .
Query Sequence  LTAVHKHYSVEEWQAFINNSSADVLKHVMVSTGTSD. . ADFEKTKQILDLNPALNFVCIDVANG. . . . . . . . . . . . . . . .
Query Conservation   
        
                         ..                    
     ................
Alig confidence 



































..

























................
Template Conservation                         
    



       
   
  

   
    
 



       
      
   
Template Sequence  LSFSIADPDFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEFGERIDLRLDFNQALTPFGAMKILRDVDAF
Template Known Secondary structure  B


SSTTTT


SSS
GGGS
TT


TTTTT
Template Predicted Secondary structure 

























Template SS confidence 















































































   137..140.........150.........160.........170.........180.........190.........200.........210......
 
   134.....140.........150.........160 .........170.. ...... .180.........190.........200..
Predicted Secondary structure  ........









.


.

.


















Query SS confidence  . . . . . . . .


























.











.





.























Query Sequence  . . . . . . . . YSEHFVQFVAKAREAWPTKTICAGNVV. TGEMCEELILSG. ADIVKV. GIGPGSVCTTRVKTGVGYPQLSAV
Query Conservation  ........        
  
        

 
 
 .
 
 
  
  

.

 
 
. 
 

           
 
    
Alig confidence  ........
















.








.











.





.





..............



Template Conservation   
  



    
      
     . 


 

           
     
 
  
    

..............

  
Template Sequence  RPTFIEQPVPRRHLDAMAGFAAALD. TPILADESCFDAVDLMEVVRRQAADAISVKIMKCGG. . . . . . . . . . . . . . LMKA
Template Known Secondary structure 

S


S
TT

S.S
STT
SST

S

TS..............
Template Predicted Secondary structure 










.



















..............
Template SS confidence 















































































   217..220.........230.........240. ........250.........260.........270....... ..280.
 
   203......210.........220.........230.......
Predicted Secondary structure 














Query SS confidence 


































Query Sequence  IECADAAHGLGGMIVSDGGCTTPGDVAKAFGGGAD
Query Conservation             




 



 
 

 







Alig confidence 


































Template Conservation        
   

        

 
   
  



 
Template Sequence  QSLMAIADTAGLPGYGGTLWEGGIALAAGTQLIAA
Template Known Secondary structure  T





ST
Template Predicted Secondary structure 









Template SS confidence 


































   282.......290.........300.........310......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions