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Job DescriptionP60560
Confidence98.37%DateThu Jan 5 12:06:53 GMT 2012
Rank130Aligned Residues166
% Identity14%Templatec3inpA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:d-ribulose-phosphate 3-epimerase; PDBTitle: 2.05 angstrom resolution crystal structure of d-ribulose-phosphate 3-2 epimerase from francisella tularensis.
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   85....90.... .....100.........110.........120.........130.........140.........150.........160...
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Query Sequence  QAFINNSSAD. VLKHVMVSTGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVVTGE
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Template Sequence  PMVLKALRDYGITAGMDVHLMVKPVDAL. . . IESFAKAGATSIVFHPEAS. . EHIDRSLQLIKSFGI. QAGLALNPATGI
Template Known Secondary structure  T

S

SS
...T
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GGG
..S
TTTS.
TT

S
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   50.........60.........70....... ..80.........90...... ...100.........110. ........120...
 
   164.....170.........180.........190.........200.........210 .........220.........230.........240.
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Query Sequence  MCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAH. . GLGGMIVSDGGCTTPGDVAKAFGGGADFVML
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Template Sequence  DCLKYVESNIDRVLIMSVNPGFQKFIPAM. . . . . . LDKAKEISKWISSTDRDILLEIDGGV. NPYNIAEIAVCGVNAFVA
Template Known Secondary structure  GGGTTTGGG
S
S
TT




TT......TS

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TTTTTT

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   124.....130.........140.........150.. .......160.........170........ .180.........190......
 
   242.......250.........260.........270.........280.........290.........300.........310...
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Query Sequence  GGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMKRHVGGVAEYRAAEGKTVKLPLRGPVENTARDILGGLR
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Template Sequence  GSAIFNSD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SYKQTIDKMRDELN
Template Known Secondary structure  STSS..................................................
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   199200...... ...210.........220
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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