Job Description P60560 Confidence 63.11% Date Thu Jan 5 12:06:53 GMT 2012 Rank 354 Aligned Residues 145 % Identity 13% Template c3ik4A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of mandelate racemase/muconate lactonizing protein2 from herpetosiphon aurantiacus Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.
Predicted Secondary structure																																																			.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	.	V	C	I	D	V	A	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																			.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																			.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	G	D	E	V	H	A	A	A	S	A	K	A	I	L	A	R	G	I	K	S	I	K	V	K	T	A	G	V	D	V	A	Y	D	L	A	R	L	R	A	I	H	Q	A	A	P	T	A	P	L	I	V	D	G	N	C	G	Y	D	V	E	R	A	L	A	F	C	A	A	C	K	A	E	S	I	P	M	V	L
Template Known Secondary structure				S															T	T										S	S																S	S	S								T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
						134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																												.													.
Query SS confidence		.	.	.	.																												.													.
Query Sequence		.	.	.	.	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	.	T	G	E	M	C	E	E	L	I	L	S	G	.	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D
Query Conservation		.	.	.	.																												.													.
Alig confidence		.	.	.	.																		.										.													.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	E	Q	P	L	P	R	E	D	W	A	G	M	A	Q	V	T	A	Q	S	G	.	F	A	V	A	A	D	E	S	A	R	S	A	H	D	V	L	R	I	A	R	E	G	T	A	S	V	I	N	I	K	L	M	K	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	E	G	L	K	M	I	A
Template Known Secondary structure						S		T	T												S	S	.	S					S	T	T		S	S											T			S											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.															.	.	.	.	.	.	280	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	Q	A	A	G	L	G	L	M	I	G	G	M	V	E	S	I	L	A	M	S	F	S	A	N	L	A	A
Template Known Secondary structure							T								S	S
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions