Job Description P60560 Confidence 99.49% Date Thu Jan 5 12:06:53 GMT 2012 Rank 61 Aligned Residues 210 % Identity 16% Template c3gr7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadph dehydrogenase; PDBTitle: structure of oye from geobacillus kaustophilus, hexagonal2 crystal form Resolution 2.30 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.												.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	R	Q	F	T	F	K	H	S	G	Q	S	W	S	G	V	P	I	I	A	A	N	M	D	T	V	G	.	.	.	.	.	.	.	.	.	.	.	T	F	S	M	A	S	A	L	A	S	F	D	I	L	T	A	V	H	K	H	Y	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	T	M	L	F	S	P	Y	T	I	R	G	L	T	L	K	N	R	I	V	M	S	P	M	C	M	Y	S	C	D	T	K	D	G	A	V	R	T	W	H	K	I	H	Y	P	A	R	A	V	G	Q	V	G	L	I	I	V	E	A	T	G	V	T	P	Q	G	R	I	S	E	R	D	L	G	I	W	S	D	D	H
Template Known Secondary structure				S	T	T	S					T	T				S	S	S												T	T	S	S	S																T	T		S									S	S	G	G	G		S	S	T	T	S				S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
			82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																																			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V
Query Conservation		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	G	L	R	E	L	V	G	L	V	K	E	H	G	A	A	I	G	I	Q	L	A	H	A	G	R	K	S	Q	V	P	G	E	I	I	A	P	S	A	V	P	F	D	D	S	S	P	T	P	K	E	M	T	K	A	D	I	E	E	T	V	Q	A	F	Q	N	G	A	R	R	A	K	E	A	G	F	D	V	I
Template Known Secondary structure															T	T											G	G	G			S	S	S					S	S	S			S	S	T	T	S																													T		S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		127	.	.	130	.	.	.																									.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.													.	.	.	.	.	.	.	.	170
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	I	D	V	A	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	T	.	.	.	.	.	.	.	.	.	.	.	.	G	E	M	C	E	E	L	I	L
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.
Template Sequence		E	I	H	A	A	H	G	Y	L	I	N	E	F	L	S	P	L	S	N	R	R	Q	D	E	Y	G	G	S	P	E	N	R	Y	R	F	L	G	E	V	I	D	A	V	R	E	V	W	D	.	G	P	L	F	V	R	I	S	A	S	D	Y	H	P	D	G	L	T	A	K	D	Y	V	P	Y	A	K	R	M	K	E
Template Known Secondary structure							T	T									T	T	T					S	T	T	S	S	S																					.	S								S				S	T	T	S			G	G	G
Template Predicted Secondary structure																																																		.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	.	A	D	F	V	M	L	G	G	M	L	A	G
Query Conservation																																																																			.
Alig confidence										.	.	.	.	.	.																																																				.
Template Conservation										.	.	.	.	.	.
Template Sequence		Q	G	V	D	L	V	D	V	.	.	.	.	.	.	S	S	G	A	I	V	P	A	R	M	N	V	Y	P	G	Y	Q	V	P	F	A	E	L	I	R	R	E	A	D	I	P	T	G	A	V	G	L	I	T	S	G	W	Q	A	E	E	I	L	Q	N	G	R	A	D	L	V	F	L	G	R	E	L	L	R
Template Known Secondary structure		T	T							.	.	.	.	.	.					S	S								T	T	T	T											T	T							S	S													T	T	S		S
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.							.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions