Job Description P60560 Confidence 82.32% Date Thu Jan 5 12:06:53 GMT 2012 Rank 296 Aligned Residues 176 % Identity 13% Template c3g0sA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from salmonella typhimurium lt2 Resolution 1.85 Å

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		47	.	.	50	.	.	.	.	.							.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.								.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure											.	.	.	.	.	.																					.	.	.	.	.	.	.																			.	.
Query SS confidence											.	.	.	.	.	.																					.	.	.	.	.	.	.																			.	.
Query Sequence		V	P	I	I	A	A	N	M	D	.	.	.	.	.	.	T	V	G	T	F	S	M	A	S	A	L	A	S	F	D	I	L	T	A	V	.	.	.	.	.	.	.	H	K	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	.	.	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E
Query Conservation											.	.	.	.	.	.																					.	.	.	.	.	.	.																			.	.
Alig confidence											.	.	.	.	.	.																					.	.	.	.	.	.	.																			.	.
Template Conservation
Template Sequence		I	V	A	L	V	T	P	M	D	E	K	G	N	V	S	R	S	C	L	K	K	L	I	D	Y	H	V	A	N	G	T	S	A	I	V	S	V	G	T	T	G	E	S	A	T	L	S	H	D	E	H	G	D	V	V	M	M	T	L	E	L	A	D	G	R	I	P	V	I	A	G	T	G	A	N	A	T	A	E	A
Template Known Secondary structure									B		T	T	S		B															T	T							S	S	T	T	T	T	G	G	G	S																	T	T	S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.								.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																							.	.	.																									.	.	.	.	.	.	.
Query SS confidence																							.	.	.																									.	.	.	.	.	.	.
Query Sequence		K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	.	.	.	G	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	.	.	.	.	.	.	.	G	N	V	V	T	G	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G
Query Conservation																							.	.	.																									.	.	.	.	.	.	.
Alig confidence																							.	.	.																			.						.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																																												.																													.	.	.	.	.	.	.	.	.
Template Sequence		I	S	L	T	Q	R	F	N	D	S	G	I	V	G	C	L	T	V	T	P	Y	Y	N	R	P	T	Q	E	G	L	F	Q	H	F	K	A	I	A	E	H	T	D	.	L	P	Q	I	L	Y	N	V	P	S	R	T	G	C	D	M	L	P	E	T	V	G	R	L	A	E	I	K	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	T	T	T	S	S											S	S																	T		S	.	S												S													T	S	T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.																													.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A	D	F	V	M	L	G	G
Query Conservation
Alig confidence		.	.	.																					.	.	.	.														.	.	.	.
Template Conservation		.	.	.																					.	.	.	.														.	.	.	.
Template Sequence		.	.	.	N	I	I	A	I	K	E	A	T	G	N	L	T	R	V	H	Q	I	K	E	.	.	.	.	L	V	S	D	D	F	I	L	L	S	G	D	D	.	.	.	.	A	S	A	L	D	F	M	Q	L	G	G	H	G	V	I	S	V	T
Template Known Secondary structure		.	.	.	T								S			T	T							T	.	.	.	.	T	S		T	T						S		G	.	.	.	.	G	G							T	T							S	G
Template Predicted Secondary structure		.	.	.																					.	.	.	.														.	.	.	.
Template SS confidence
					156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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