Job Description P60560 Confidence 60.36% Date Thu Jan 5 12:06:53 GMT 2012 Rank 362 Aligned Residues 189 % Identity 13% Template c3fkkA_ PDB info PDB header:lyase Chain: A: PDB Molecule:l-2-keto-3-deoxyarabonate dehydratase; PDBTitle: structure of l-2-keto-3-deoxyarabonate dehydratase Resolution 2.10 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.							.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.								.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.																					.	.	.	.	.	.	.																						.	.
Query SS confidence																		.	.	.	.	.	.																					.	.	.	.	.	.	.																						.	.
Query Sequence		S	G	Q	S	W	S	G	V	P	I	I	A	A	N	M	D	.	.	.	.	.	.	T	V	G	T	F	S	M	A	S	A	L	A	S	F	D	I	L	T	A	V	.	.	.	.	.	.	.	H	K	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	.	.	K	H	V	M	V	S	T	G
Query Conservation																		.	.	.	.	.	.																					.	.	.	.	.	.	.																						.	.
Alig confidence																		.	.	.	.	.	.																					.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		T	P	R	H	R	G	I	F	P	V	V	P	T	T	F	A	D	T	G	D	L	D	L	A	S	Q	K	R	A	V	D	F	M	I	D	A	G	S	D	G	L	C	I	L	A	N	F	S	E	Q	F	A	I	T	D	D	E	R	D	V	L	T	R	T	I	L	E	H	V	A	G	R	V	P	V	I	V	T	T	S
Template Known Secondary structure				S							B					B		T	T	S	S	B															T	T		S					S	S	G	G	G	T	G	G	G	S																	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.							.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																															.	.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		T	S	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	.	.	.	.	.	.	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	.	.	.	.	.	.	G	N	V	V	T	G	E	M	C	E	E	L	I	L	S	G
Query Conservation																															.	.	.	.	.	.																								.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.																		.						.	.	.	.	.	.
Template Conservation																																																						.
Template Sequence		H	Y	S	T	Q	V	C	A	A	R	S	L	R	A	Q	Q	L	G	A	A	M	V	M	A	M	P	P	Y	H	G	A	T	F	R	V	P	E	A	Q	I	F	E	F	Y	A	R	V	S	D	A	I	A	.	I	P	I	M	V	Q	D	A	P	A	S	G	T	A	L	S	A	P	F	L	A	R	M	A	R	E	I
Template Known Secondary structure			S															T	T		S							S		B	T	T	T	B																			S	.	S								G	G	G																S
Template Predicted Secondary structure																																																						.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A	D	F	V	M	L	G	G	M	L
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Sequence		E	Q	V	A	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	E	T	P	G	A	A	N	K	L	R	E	L	I	R	L	G	G	D	A	I	E	G	P	W	D	G	E	.	.	.	E	A	I	T	L	L	A	D	L	H	A	G	A	T	G	A	M	T	G	G	G	F
Template Known Secondary structure		T	T					.	.	.	.	.	.	.	.	.	.	.	.	.				S	T	T													G	G	G								G	.	.	.	G	G	T	T							T	T								S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template SS confidence
		176	.	.	.	180	.														.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions