Job Description P60560 Confidence 91.83% Date Thu Jan 5 12:06:53 GMT 2012 Rank 234 Aligned Residues 143 % Identity 13% Template c3ez4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-methyl-2-oxobutanoate hydroxymethyltransferase; PDBTitle: crystal structure of 3-methyl-2-oxobutanoate2 hydroxymethyltransferase from burkholderia pseudomallei Resolution 2.10 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.															.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.				.	.	110	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.							.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.							.	.	.
Query Sequence		M	D	T	V	G	T	F	S	M	A	S	A	L	A	S	F	D	I	L	T	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	K	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	.	S	T	G	T	S	D	.	.	.	A	D	F	E	K	T	K	Q
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.							.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.							.	.	.
Template Conservation
Template Sequence		M	L	T	S	Y	D	A	S	F	A	A	L	L	D	R	A	N	V	D	V	Q	L	I	G	D	S	L	G	N	V	L	Q	G	Q	A	T	T	L	P	V	T	L	D	D	I	A	Y	H	T	A	C	V	A	R	A	Q	P	R	G	L	V	V	A	D	L	P	F	G	T	Y	G	T	P	A	D	A	F	A	S	A
Template Known Secondary structure							S										T	T		S						T	T					T	T			S	S	S	T	T																T			S	S								T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	T	G	E	.	.	.	.	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K
Query Conservation																																																		.	.	.	.
Alig confidence																.	.	.	.																	.	.													.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.																	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	L	M	R	A	G	A	Q	M	V	K	L	E	.	.	.	.	G	G	E	W	L	A	E	T	V	R	F	L	V	E	R	A	.	.	V	P	V	C	A	H	V	G	L	G	A	A	Q	L	L	R	D	A	R	A	V	E	E	A	G	A	Q	L	I	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T	T		S						.	.	.	.			G	G	G										T	T	.	.																									T		S					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.																	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G
Query Conservation
Alig confidence		.	.						.											.	.	.
Template Conservation		.	.						.											.	.	.
Template Sequence		.	.	E	A	V	P	T	.	L	V	A	A	E	V	T	R	E	L	.	.	.	S	I	P	T	I	G	I	G	A
Template Known Secondary structure		.	.		S				.											.	.	.	S	S						S	S
Template Predicted Secondary structure		.	.						.											.	.	.
Template SS confidence
				179	180	.	.	.		.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions