Job Description P60560 Confidence 39.04% Date Thu Jan 5 12:06:53 GMT 2012 Rank 438 Aligned Residues 166 % Identity 16% Template c3d0cB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 oceanobacillus iheyensis at 1.9 a resolution Resolution 1.90 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.								.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																		.	.	.	.	.	.	.																																					.
Query SS confidence																		.	.	.	.	.	.	.																																					.
Query Sequence		F	S	M	A	S	A	L	A	S	F	D	I	L	T	A	V	.	.	.	.	.	.	.	H	K	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	.	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A
Query Conservation																		.	.	.	.	.	.	.																																					.
Alig confidence																		.	.	.	.	.	.	.																																					.
Template Conservation
Template Sequence		D	D	N	V	E	F	L	L	Q	N	G	I	E	V	I	V	P	N	G	N	T	G	E	F	Y	A	L	T	I	E	E	A	K	Q	V	A	T	R	V	T	E	L	V	N	G	R	A	T	V	V	A	G	I	G	Y	S	V	D	T	A	I	E	L	G	K	S	A	I	D	S	G	A	D	C	V	X	I	H	Q	P
Template Known Secondary structure											T	T						T	T	S	G	G	G	T	G	G	G	S																	T	T	S	S								S	S														T	T		S
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		132				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure			.	.	.																									.	.	.
Query SS confidence			.	.	.																									.	.	.
Query Sequence		N	.	.	.	G	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	.	.	.	G	N	V	V	T	G	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C
Query Conservation			.	.	.																									.	.	.
Alig confidence			.	.	.																			.						.	.	.																		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.																										.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	H	P	Y	I	T	D	A	G	A	V	E	Y	Y	R	N	I	I	E	A	L	D	.	A	P	S	I	I	Y	F	K	D	A	H	L	S	D	D	V	I	K	E	L	A	P	L	D	K	.	.	.	L	V	G	I	K	Y	A	I	N	D	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	R	V	T	Q	V
Template Known Secondary structure				S																		S	S	.	S									T	T	S		T							T	T		T	T	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.																										.	.	.											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160				.	.	.	.	.	.	.	.	.	170													.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A	D	F	V	M	L	G	G
Query Conservation
Alig confidence																	.	.
Template Conservation																	.	.
Template Sequence		X	R	A	V	P	K	S	S	N	V	A	F	I	C	G	.	.	T	A	E	K	W	A	P	F	F	Y	H	A	G	A	V	G	F	T	S	G	L
Template Known Secondary structure					S		G	G	G							T	.	.	T												T							S	G
Template Predicted Secondary structure																	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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