Job Description P60560 Confidence 39.54% Date Thu Jan 5 12:06:53 GMT 2012 Rank 437 Aligned Residues 138 % Identity 16% Template c3cb3B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of l-talarate dehydratase from polaromonas sp. js6662 complexed with mg and l-glucarate Resolution 2.00 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	.	.	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																												.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	I	D	Q	L	M	V	N	A	S	A	S	I	E	R	G	I	G	G	I	K	L	K	V	G	Q	P	D	G	A	L	D	I	A	R	V	T	A	V	R	K	H	L	G	D	A	V	P	L	M	V	D	A	N	Q	Q	W	D	R	P	T	A	Q	R	M	C	R	I	F	E	P	F	N	L	V	W	I	E	E	P
Template Known Secondary structure																T	T											S																		T	T	S							T	T															G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
							139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure		.	.	.	.	.																				.																.							.
Query SS confidence		.	.	.	.	.																				.																.							.
Query Sequence		.	.	.	.	.	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	.	N	V	V	T	G	E	M	C	E	E	L	I	L	S	G	.	A	D	I	V	K	V	.	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H
Query Conservation		.	.	.	.	.																				.																.							.
Alig confidence		.	.	.	.	.													.							.																.							.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	A	Y	D	H	E	G	H	A	A	L	A	L	Q	F	D	.	T	P	I	A	T	G	E	M	L	T	S	A	A	E	H	G	D	L	I	R	H	R	A	A	D	Y	L	M	P	D	A	P	R	V	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	P	F	L	K	I	A	S	L	A	E
Template Known Secondary structure		S		T	T													S	.	S						T	T			S											T			S										T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.															.	.	.	.	.	.	.	300	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	A	G	L	M	L	A	P	H	F	A	M	E	L	H	V	H	L	A	A	A	Y
Template Known Secondary structure			T	T							S											T	S
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions