Job Description P60560 Confidence 100.00% Date Thu Jan 5 12:06:53 GMT 2012 Rank 31 Aligned Residues 267 % Identity 18% Template c3bw2A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:2-nitropropane dioxygenase; PDBTitle: crystal structures and site-directed mutagenesis study of nitroalkane2 oxidase from streptomyces ansochromogenes Resolution 2.10 Å

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		45	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure													.																								.																																				.	.	.	.	.	.	.	.	.
Query SS confidence													.																								.																																				.	.	.	.	.	.	.	.	.
Query Sequence		S	G	V	P	I	I	A	A	N	M	D	.	T	V	G	T	F	S	M	A	S	A	L	A	S	F	D	I	L	T	A	V	H	K	H	.	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	K	T	.	.	.	.	.	.	.	.	.
Query Conservation													.																								.																																				.	.	.	.	.	.	.	.	.
Alig confidence													.																								.																																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	P	L	P	I	V	Q	A	P	M	A	G	G	V	S	V	P	Q	L	A	A	A	V	C	E	A	G	G	L	G	F	L	A	A	G	Y	K	T	A	D	G	M	Y	Q	E	I	K	R	L	R	G	L	T	G	R	P	F	G	V	N	V	F	M	P	Q	P	E	L	G	A	V	E	V	Y	A	H	Q	L	A	G
Template Known Secondary structure		S	S	S	S							T	T	T	T	S											T	T	S	B						T	T	S																		S																							T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
																						114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	T	G	E	M	C	E	E	L	I	L	S	G	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		E	A	A	W	Y	E	T	E	L	G	D	P	D	G	G	R	D	D	G	Y	D	A	K	L	A	V	L	L	D	D	P	V	P	V	V	S	F	H	F	G	V	P	D	R	.	.	.	.	.	E	V	I	A	R	L	R	R	A	G	T	L	T	L	V	T	A	T	T	P	E	E	A	R	A	V	E	A	A	G	A
Template Known Secondary structure						T	T						S		S		S	S	T	T											S			S						S	S					.	.	.	.	.									T	T								S	S										T	T
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190						.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	.	.	.	.	.	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A	D	F	V	M	L	G	G	M	L	A	G	H
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.																				.	.	.
Template Conservation																																											.	.	.
Template Sequence		D	A	V	I	A	Q	G	V	E	A	G	G	H	Q	G	T	H	R	D	S	S	E	D	D	G	A	G	I	G	L	L	S	L	L	A	Q	V	R	E	A	V	.	.	.	D	I	P	V	V	A	A	G	G	I	M	R	G	G	Q	I	A	A	V	L	A	A	G	A	D	A	A	Q	L	G	T	A	F	L	A	T
Template Known Secondary structure		S							T	T		S						S	S			G	G	G	T	T																	.	.	.	S	S						S	S			S										T	T		S					S					T	S
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.				.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	S	G	G	R	I	V	E	E	N	G	E	K	F	M	L	F	Y	G	M	S	S	E	S	A	M	K	R	H	V	G	G	V	A	E	Y	R	A	A	E	G	K	T	V	K	L	P	L	R	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	S	G	A	P	G	P	H	K	R	A	L	T	D	P	L	F	A	R	T	R	L	T	R	A	F	T	G	R	P	A	R	S	L	V	N	R	F	L	R	E	H	G	P	Y	A	P	A	A	Y	P	D	V	H	H	L	T	S	P	L	R	K	A	A	A	K	A	G	D	A	Q	G	M	A	L	W	A	G	Q
Template Known Secondary structure		T	T											T	T		G	G	G							S	T	T	T	S	S														G	G	G			S		T	T																	T		G	G	G	S			B			T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
											301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	V	E	N	T	A	R	D	I	L	G	G	L	R	S	A	C	T	Y	V
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	H	R	M	A	R	E	L	P	A	G	R	L	V	E	V	L	A	A	E	L	A	E	A	R	T	A	L
Template Known Secondary structure		T	G	G	G				S																				T
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions