Return to main results Retrieve Phyre Job Id

Job DescriptionP60560
Confidence71.76%DateThu Jan 5 12:06:53 GMT 2012
Rank327Aligned Residues144
% Identity15%Templatec3bjsB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme; PDBTitle: crystal structure of a member of enolase superfamily from polaromonas2 sp. js666
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7980.........90.........100.........110.........120..... ....130........
Predicted Secondary structure 















.




...................
Query SS confidence 














































.












. . . . . . . . . . . . . . . . . . .
Query Sequence  YSVEEWQAFINNSSADVLKHVMVSTGTSDADFEKTKQILDLNPALNF. VCIDVANGYSEHF. . . . . . . . . . . . . . . . . . .
Query Conservation     
                                           .  
          ...................
Alig confidence 














































.












...................
Template Conservation                  
    




     
   
  

   
    
 



       
      
    
  



Template Sequence  QPKESLAEEAQEYIARGYKALKLRIGDAARVDIERVRHVRKVLGDEVDILTDANTAYTMADARRVLPVLAEIQAGWLEEP
Template Known Secondary structure  S
TT
S

S

TTS
TT


TT
S


Template Predicted Secondary structure 




























Template SS confidence 















































































   182.......190.........200.........210.........220.........230.........240.........250.........260.
 
   139140.........150.........160 .........170.. .......180.........190.........200.........210.
Predicted Secondary structure  .....








.


.






















Query SS confidence  . . . . .





















.











.






































Query Sequence  . . . . . VQFVAKAREAWPTKTICAGNVV. TGEMCEELILSG. ADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHG
Query Conservation  .....   
  
        

 
 
 .
 
 
  
  

.

 
 
 
 

           
 
    
         
Alig confidence  .....





















.











.












.............












Template Conservation      
      
      



 


          
     
 
  
    

.............
         
  
Template Sequence  FACNDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGG. . . . . . . . . . . . . ITEGIRIAAMASA
Template Known Secondary structure  S
TT
TTT
SSS

TT





BTTTSS.............
Template Predicted Secondary structure 



























.............
Template SS confidence 















































































   262.......270.........280.........290.........300.........310..... ....320........
 
   212.......220.........230......
Predicted Secondary structure 











Query SS confidence 
























Query Sequence  LGGMIVSDGGCTTPGDVAKAFGGGA
Query Conservation    




 



 
 

 






Alig confidence 









.













Template Conservation   

       . 
 
   
  



Template Sequence  YRIPINAHSS. ATGLNHAATIHFLA
Template Known Secondary structure  TT

B

B

.SS
Template Predicted Secondary structure 





.

Template SS confidence 
























   329330........ .340.........350..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions