Job Description P60560 Confidence 52.38% Date Thu Jan 5 12:06:53 GMT 2012 Rank 386 Aligned Residues 147 % Identity 14% Template c2zc8B_ PDB info PDB header:metal binding protein Chain: B: PDB Molecule:n-acylamino acid racemase; PDBTitle: crystal structure of n-acylamino acid racemase from thermus2 thermophilus hb8 Resolution 1.95 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	V	H	K	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.
Template Sequence		V	S	L	G	I	Q	P	S	V	E	D	T	L	R	V	V	E	R	H	L	E	E	G	Y	R	R	I	K	L	K	I	K	.	.	P	G	W	D	Y	E	V	L	K	A	V	R	E	A	F	P	E	A	T	L	T	A	D	A	N	S	A	Y	S	L	A	N	L	A	Q	L	K	R	L	D	E	L	R	L	D	Y
Template Known Secondary structure								S	S														T	T		S							B	.	.	T	T	B	S												T	T	S							T	T				G	G	G							G	G	G	G	T		S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.			.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
											139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																							.													.							.
Query SS confidence		.	.	.	.	.	.	.	.	.																							.													.							.
Query Sequence		.	.	.	.	.	.	.	.	.	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	.	T	G	E	M	C	E	E	L	I	L	S	G	.	A	D	I	V	K	V	.	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A
Query Conservation		.	.	.	.	.	.	.	.	.																							.													.							.
Alig confidence		.	.	.	.	.	.	.	.	.													.										.													.							.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	Q	P	L	A	Y	D	D	L	L	D	H	A	K	L	Q	R	E	L	S	.	T	P	I	C	L	D	E	S	L	T	G	A	E	K	A	R	K	A	I	E	L	G	A	G	R	V	F	N	V	K	P	A	R	L	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	E	S	L	R	V	H
Template Known Secondary structure						S		T	T		S											S	.	S					S	T	T			S											T			S										T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.															.	270	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	A	E	S	A	G	I	P	L	W	M	G	G	M	L	E	A	G	V	G	R	A	H	N	L	H	L	A	T
Template Known Secondary structure							T	T																						T	T
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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