Job Description P60560 Confidence 98.08% Date Thu Jan 5 12:06:53 GMT 2012 Rank 147 Aligned Residues 104 % Identity 22% Template c2zbtB_ PDB info PDB header:lyase Chain: B: PDB Molecule:pyridoxal biosynthesis lyase pdxs; PDBTitle: crystal structure of pyridoxine biosynthesis protein from thermus2 thermophilus hb8 Resolution 1.65 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.																								.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.																								.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	.	N	V	V	T	G	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	.	.	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.																								.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.							.																								.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.
Template Sequence		P	K	I	I	K	E	I	M	A	A	V	S	.	I	P	V	M	A	K	V	R	I	G	H	F	V	E	A	M	I	L	E	A	I	G	V	D	F	I	D	E	S	E	V	L	T	P	A	D	E	E	H	H	I	D	K	W	K	F	K	V	P	F	V	C	G	A	R	N	L	G	E	A	L	R	R	I	A	E	G
Template Known Secondary structure													S	.	S								T	T											T	T		S						T	T	S			S		S	S					G	G	G		S	S							S	S										T	T
Template Predicted Secondary structure														.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
																																																				200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	M	I	R	T	K	G	E	A	G	T	G	N	V	V	E	A	V	R	H	A	R	T	M	W	K	E	I	R	Y	V	Q	S	L	R	E	D	E	L	M	A	Y	A	K	E	I	G	A	P	F	E	L	V	K	W	V	H	D	H	G	R	L	P	V	V	N	F	A	A	G	G	I	A	T	P	A	D	A	A
Template Known Secondary structure			S								S	S	S			T																				S		G	G	G									T													S	S		S	S				B		S	S			S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	F	G	G	G	A	D	F	V	M	L	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	M	M	H	L	G	M	D	G	V	F	V	G	S
Template Known Secondary structure						T	T		S						G
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions