Return to main results Retrieve Phyre Job Id

Job DescriptionP60560
Confidence90.26%DateThu Jan 5 12:06:53 GMT 2012
Rank245Aligned Residues88
% Identity15%Templatec2vwtA_
PDB info PDB header:lyaseChain: A: PDB Molecule:yfau, 2-keto-3-deoxy sugar aldolase; PDBTitle: crystal structure of yfau, a metal ion dependent class ii2 aldolase from escherichia coli k12 - mg-pyruvate product3 complex
Resolution1.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   142.......150.........160.........170.........180.........190.........200.........210.........220.
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  VAKAREAWPTKTICAGNVVTGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVSDGG
Query Conservation 
  
        

 
 
 
 
 
  
  



 
 
 
 

           
 
    
           




 

Alig confidence 












































............






















Template Conservation 
   
  
    
       
   
     
 
 
 

 

    ............       
 
    
    


 
Template Sequence  FKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNT. . . . . . . . . . . . IQDLYHQLQAVAPYASQPVIRPV
Template Known Secondary structure  TT


S

TT

STTTS


............TTSSS
S
Template Predicted Secondary structure 
















............





Template SS confidence 















































































   910.........20.........30.........40.........50... ......60.........70......
 
   222.......230.........240.
Predicted Secondary structure 






Query SS confidence 



















Query Sequence  CTTPGDVAKAFGGGADFVML
Query Conservation 

 
 

 







 
 
Alig confidence 



















Template Conservation        
   

 

 



Template Sequence  EGSKPLIKQVLDIGAQTLLI
Template Known Secondary structure  S

TT

Template Predicted Secondary structure 






Template SS confidence 



















   77..80.........90......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions