Job Description P60560 Confidence 99.48% Date Thu Jan 5 12:06:53 GMT 2012 Rank 62 Aligned Residues 274 % Identity 9% Template c2vkzH_ PDB info PDB header:transferase Chain: H: PDB Molecule:fatty acid synthase subunit beta; PDBTitle: structure of the cerulenin-inhibited fungal fatty acid2 synthase type i multienzyme complex Resolution 4.0 Å

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		48	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.
Predicted Secondary structure										.																					.	.																																										.	.	.	.	.
Query SS confidence										.																					.	.																																										.	.	.	.	.
Query Sequence		P	I	I	A	A	N	M	D	.	T	V	G	T	F	S	M	A	S	A	L	A	S	F	D	I	L	T	A	V	.	.	H	K	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	K	T	K	Q	I	.	.	.	.	.	L	D	L
Query Conservation										.																					.	.																																										.	.	.	.	.
Alig confidence										.																					.	.																																										.	.	.	.	.
Template Conservation
Template Sequence		P	L	L	V	P	G	M	T	P	C	T	V	S	P	D	F	V	A	A	T	T	N	A	G	Y	T	I	E	L	A	G	G	G	Y	F	S	A	A	G	M	T	A	A	I	D	S	V	V	S	Q	I	E	K	G	S	T	F	G	I	N	L	I	Y	V	N	P	F	M	L	Q	W	G	I	P	L	I	K	E	L	R
Template Known Secondary structure		S											T											T	T							G	G	G			S															S		T	T									T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		591	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.								170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.
Query Sequence		N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	T	G	E	M	C	E	E	L	I	.	.	.	.	.	.	.	L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T
Query Conservation																																																				.	.	.	.	.	.	.
Alig confidence																				.	.																			.												.	.	.	.	.	.	.
Template Conservation																				.	.																			.
Template Sequence		S	K	G	Y	P	I	Q	F	L	T	I	G	A	G	V	P	S	L	.	.	E	V	A	S	E	Y	I	E	T	L	G	L	K	Y	L	G	L	K	.	P	G	S	I	D	A	I	S	Q	V	I	N	I	A	K	A	H	P	N	F	P	I	A	L	Q	W	T	G	G	R	G	G	G	H	H	S	F	E	D	A	H
Template Known Secondary structure			T	T		S								S	S					.	.										S			S						.			S														S	T	T	S									S	S		S					S			S	S
Template Predicted Secondary structure																				.	.																			.
Template SS confidence
		671	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.			.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.		.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.												.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	.	.	.	.	.	.	.	.	.	.	.	G	G	G	A	D	F	V	M	L	G	G	M	L	A	G	H	E	E	S	G	G	R	I	V	E	E	N	G	E
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	T	P	M	L	Q	M	Y	S	K	I	R	R	H	P	N	I	M	L	I	F	G	S	G	F	G	S	A	D	D	T	Y	P	Y	L	T	G	E	W	S	T	K	F	D	Y	P	P	M	P	F	D	G	F	L	F	G	S	R	V	M	I	A	K	E	V	K	T	S	P	D	A	K	K	C	I
Template Known Secondary structure		.	.	.	.	.	.											T	T		T	T							S	S			S					T					T		G	G	G	G	G	T							S					S	G	G	G	T	T	S	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								748	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		K	F	M	L	F	Y	G	M	S	S	E	S	A	M	K	R	H	V	G	G	V	A	E	Y	R	A	A	E	G	K	T	V	K	L	P	L	R	G	P	V	E	N	T	A	R	D	I	L	G	G	L	R	S	A	C	T	Y	V	.	G	A	S	R	L	K	E	L	T	K	R	T	T	F	I
Query Conservation																																																												.
Alig confidence						.	.	.	.																																																			.
Template Conservation						.	.	.	.
Template Sequence		A	A	C	T	.	.	.	.	G	V	P	D	D	K	W	E	Q	T	Y	K	K	P	T	G	G	I	V	T	V	R	S	E	M	G	E	P	I	H	K	I	A	T	R	G	V	M	L	W	K	E	F	D	E	T	I	F	N	L	P	K	N	K	L	V	P	T	L	E	A	K	R	D	Y	I
Template Known Secondary structure			T			.	.	.	.				G	G	G	G	G	G	G	G	T	S			S	S							T	T	S																					T	T	T	S		T	T	T							T	T
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		822	.	.	.					.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions