Job Description P60560 Confidence 93.01% Date Thu Jan 5 12:06:53 GMT 2012 Rank 227 Aligned Residues 194 % Identity 11% Template c2r8wB_ PDB info PDB header:lyase Chain: B: PDB Molecule:agr_c_1641p; PDBTitle: the crystal structure of dihydrodipicolinate synthase (atu0899) from2 agrobacterium tumefaciens str. c58 Resolution 1.80 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.							.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.								.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.																					.	.	.	.	.	.	.																			.
Query SS confidence																														.	.	.	.	.	.																					.	.	.	.	.	.	.																			.
Query Sequence		D	V	E	L	E	R	Q	F	T	F	K	H	S	G	Q	S	W	S	G	V	P	I	I	A	A	N	M	D	.	.	.	.	.	.	T	V	G	T	F	S	M	A	S	A	L	A	S	F	D	I	L	T	A	V	.	.	.	.	.	.	.	H	K	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	.
Query Conservation																														.	.	.	.	.	.																					.	.	.	.	.	.	.																			.
Alig confidence										.	.	.	.	.	.	.	.													.	.	.	.	.	.																					.	.	.	.	.	.	.																			.
Template Conservation										.	.	.	.	.	.	.	.
Template Sequence		E	T	D	X	A	T	R	F	.	.	.	.	.	.	.	.	K	G	L	S	A	F	P	I	T	P	A	D	E	A	G	R	V	D	I	E	A	F	S	A	L	I	A	R	L	D	A	A	E	V	D	S	V	G	I	L	G	S	T	G	I	Y	X	Y	L	T	R	E	E	R	R	R	A	I	E	A	A	A	T	I
Template Known Secondary structure					G	G	G	G	G	.	.	.	.	.	.	.	.											B		T	T			B															T	T		S					S	S	T	T	T	T	G	G	G	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.									.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
			94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.								.	.	.	160	.	.
Predicted Secondary structure		.																																								.	.	.																									.	.	.	.	.	.	.
Query SS confidence		.																																								.	.	.																									.	.	.	.	.	.	.
Query Sequence		.	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	.	.	.	G	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	.	.	.	.	.	.	.	G	N	V	V	T	G
Query Conservation		.																																								.	.	.																									.	.	.	.	.	.	.
Alig confidence		.																																								.	.	.																			.						.	.	.	.	.	.	.
Template Conservation																																																															.
Template Sequence		L	R	G	R	R	T	L	X	A	G	I	G	A	L	R	T	D	E	A	V	A	L	A	K	D	A	E	A	A	G	A	D	A	L	L	L	A	P	V	S	Y	T	P	L	T	Q	E	E	A	Y	H	H	F	A	A	V	A	G	A	T	A	.	L	P	L	A	I	Y	N	N	P	T	T	T	R	F	T	F	S	D
Template Known Secondary structure			T	T	S	S									S	S															T		S									S	S																			S	.	S								G	G	G	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A	D	F	V	M	L	G
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template Sequence		E	L	L	V	R	L	A	Y	I	P	.	.	.	.	.	.	.	.	.	.	.	.	N	I	R	A	I	K	X	P	L	P	A	D	A	D	Y	A	G	E	L	A	R	L	R	P	K	L	S	D	D	F	A	I	G	Y	S	G	.	.	.	.	D	W	G	C	T	D	A	T	L	A	G	G	D	T	W	Y	S	V
Template Known Secondary structure									T	S	T	.	.	.	.	.	.	.	.	.	.	.	.	T										T	T											T	T	T	S		T	T								.	.	.	.										T	T		S					S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.													.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		243	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	G	L
Template Known Secondary structure		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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