Job Description P60560 Confidence 61.31% Date Thu Jan 5 12:06:53 GMT 2012 Rank 360 Aligned Residues 140 % Identity 16% Template c2pp1C_ PDB info PDB header:lyase Chain: C: PDB Molecule:l-talarate/galactarate dehydratase; PDBTitle: crystal structure of l-talarate/galactarate dehydratase from2 salmonella typhimurium lt2 liganded with mg and l-lyxarohydroxamate Resolution 2.20 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	.	.	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																														.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	T	P	L	D	Q	V	L	K	N	V	V	I	S	R	E	N	G	I	G	G	I	K	L	K	V	G	Q	P	N	C	A	E	D	I	R	R	L	T	A	V	R	E	A	L	G	D	E	F	P	L	M	V	D	A	N	Q	Q	W	D	R	E	T	A	I	R	M	G	R	K	M	E	Q	F	N	L	I	W	I	E
Template Known Secondary structure		T	S															T	T											S																		S	S	S							T	T															G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
									139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																							.													.							.
Query SS confidence		.	.	.	.	.	.	.																							.													.							.
Query Sequence		.	.	.	.	.	.	.	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	.	T	G	E	M	C	E	E	L	I	L	S	G	.	A	D	I	V	K	V	.	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A
Query Conservation		.	.	.	.	.	.	.																							.													.							.
Alig confidence		.	.	.	.	.	.	.													.										.													.							.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	P	L	D	A	Y	D	I	E	G	H	A	Q	L	A	A	A	L	D	.	T	P	I	A	T	G	E	M	L	T	S	F	R	E	H	E	Q	L	I	L	G	N	A	S	D	F	V	Q	P	D	A	P	R	V	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	P	F	L	K	I	M	D	L
Template Known Secondary structure				S		T	T													S	.	S						T	T			S										T	T			S										T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.															.	.	310	.	.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	K	H	G	R	K	L	A	P	H	F	A	M	E	V	H	L	H	L	S	A	A	Y
Template Known Secondary structure					T	T							S											T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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