Job Description P60560 Confidence 55.46% Date Thu Jan 5 12:06:53 GMT 2012 Rank 378 Aligned Residues 145 % Identity 15% Template c2ox4E_ PDB info PDB header:isomerase Chain: E: PDB Molecule:putative mandelate racemase; PDBTitle: crystal structure of putative dehydratase from zymomonas mobilis zm4 Resolution 1.80 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query Sequence		K	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	.	.	.
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation
Template Sequence		S	K	G	R	K	E	E	Y	A	E	E	A	L	K	A	V	A	E	G	Y	D	A	V	K	V	D	V	L	A	H	D	R	N	G	S	R	E	G	V	F	L	E	G	P	L	P	S	E	T	I	K	I	G	V	E	R	V	E	A	I	R	N	A	V	G	P	D	V	D	I	I	V	E	N	H	G	H	T	D	L
Template Known Secondary structure					S														T	T		S						S	S	S	S		T	T	S			T	T				S	S	S																						T	T	S							T	T		S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
																							134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.													.							.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.													.							.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	.	T	G	E	M	C	E	E	L	I	L	S	G	.	A	D	I	V	K	V	.	G	I	G	P	G	S	V	C	T	T	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.													.							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.										.													.							.							.	.	.	.	.
Template Conservation																																								.																																					.	.	.	.	.
Template Sequence		V	S	A	I	Q	F	A	K	A	I	E	E	F	N	I	F	F	Y	E	E	I	N	T	P	L	N	P	R	L	L	K	E	A	K	K	K	I	D	.	I	P	L	A	S	G	E	R	I	Y	S	R	W	G	F	L	P	F	L	E	D	R	S	I	D	V	I	Q	P	D	L	G	T	C	G	G	.	.	.	.	.
Template Known Secondary structure												G	G	G			S						S		T	T	S	T								T	T			.	S						T	T													T	T			S						T	T	T	T	T		.	.	.	.	.
Template Predicted Secondary structure																																								.																																					.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																			.
Template Conservation		.	.	.	.	.	.	.	.	.																			.
Template Sequence		.	.	.	.	.	.	.	.	.	F	T	E	F	K	K	I	A	D	M	A	H	I	F	E	V	T	V	.	Q	A	H	V	A	G	T	G	V	A	E	A	A	S	L	H	A	E	I	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.														T	T				.						S														T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																			.
Template SS confidence
											295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions