Return to main results Retrieve Phyre Job Id

Job DescriptionP60560
Confidence66.93%DateThu Jan 5 12:06:53 GMT 2012
Rank342Aligned Residues85
% Identity9%Templatec2nx9B_
PDB info PDB header:lyaseChain: B: PDB Molecule:oxaloacetate decarboxylase 2, subunit alpha; PDBTitle: crystal structure of the carboxyltransferase domain of the2 oxaloacetate decarboxylase na+ pump from vibrio cholerae
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.........120........ .130.........140.........150....... ..160.........170.........180
Predicted Secondary structure 






..










....









Query SS confidence 





















. .




























. . . .






















Query Sequence  DADFEKTKQILDLNPALNFVCI. . DVANGYSEHFVQFVAKAREAWPTKTICAG. . . . NVVTGEMCEELILSGADIVKVGI
Query Conservation                       
..             
  
        

 
.... 
 
 
 
  
  



 
 
 
Alig confidence 





















..





















.





....






















Template Conservation    
     
  
   


 
 
 

 
   
  
  

  

    .
 
  
 


 


 

 



 


  

 

Template Sequence  NLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQVD. VELHLHCHSTAGLADMTLLKAIEAGVDRVDTAI
Template Known Secondary structure 
TT
SSSS


S
.S


TTS
TT
SB
Template Predicted Secondary structure 














.










Template SS confidence 















































































   156...160.........170.........180.........190.........200. ........210.........220.........230....
 
   181........190..
Predicted Secondary structure 











Query SS confidence 











Query Sequence  GPGSVCTTRVKT
Query Conservation   

         
Alig confidence 











Template Conservation   


   

   
Template Sequence  SSMSGTYGHPAT
Template Known Secondary structure  GGG
STTS

B
Template Predicted Secondary structure 










Template SS confidence 











   235....240......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions