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Job Description | P60560 | Confidence | 30.91% | Date | Thu Jan 5 12:06:53 GMT 2012 |
Rank | 483 | Aligned Residues | 86 |
% Identity | 14% | Template | c2nvaH_ |
PDB info |
PDB header:lyase | Chain: H: PDB Molecule:arginine decarboxylase, a207r protein; |
PDBTitle: the x-ray crystal structure of the paramecium bursaria2 chlorella virus arginine decarboxylase bound to agmatine
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Resolution | 1.80 Å |
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134 | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
Y | S | E | H | F | V | Q | F | V | A | K | A | R | E | A | W | P | T | K | T | I | C | A | . |
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G | N | V | V | T | G | E | M | C | E | E | L | I | L | S | G | A | D | I | V | K | V | G | I | G | P | G | S | V | C | T | T | R | V | K | T | G | V | G | Y | P | Q | L | S | A | V | I | E | C | A | D | A | A | H | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
S | P | K | I | V | E | D | L | I | D | Q | W | T | I | L | F | P | R | V | T | P | H | Y | A | V | K | C | N | N | D | E | V | L | L | K | T | M | C | D | K | N | V | . |
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A | S | S | S | E | I | K | K | V | I | Q | I |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
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. | 70 | . | . | . | . | . | . | . | . | . | 80 |
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212 | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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L | G | G | M | I | V | S | D | G | G | C | T | T | P | G | D | V | A | K | A | F | G | G | G | A | D | F | V | M | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
G | V | S | P | S | R | I | I | F | A | H | T | M | K | T | I | D | D | L | I | F | A | K | D | Q | G | V | D | I | A | T | F |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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