 |
Job Description | P60560 | Confidence | 80.29% | Date | Thu Jan 5 12:06:53 GMT 2012 |
Rank | 306 | Aligned Residues | 76 |
% Identity | 12% | Template | c2nuxB_ |
PDB info |
PDB header:lyase | Chain: B: PDB Molecule:2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate |
PDBTitle: 2-keto-3-deoxygluconate aldolase from sulfolobus acidocaldarius,2 native structure in p6522 at 2.5 a resolution
|
Resolution | 2.50 Å |
|
 |
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | |
|
|
. | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
Query Sequence |   |
G | E | M | C | E | E | L | I | L | S | G | A | D | I | V | K | V | G | I | G | P | G | S | V | C | T | T | R | V | K | T | G | V | G | Y | P | Q | L | S | A | V | I | E | C | A | D | A | A | H | G | L | G | G | M | I | V | S | D | G | G | C | T | T | P | G | D | V | A | K | A | F | . |
. |
. |
G | G | G | A | D | F |
Query Conservation |   |
  |
|   |
|   |   |
|   |   |
|
|
|
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|
|   |
|   |
|
|   |
|
|
| . | . | . |
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|   |   |
|
|   |
|
|   |   |   |
|
|
|
|
|   |   | . | . | . | . | . | . | . | . |   |
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |
|   |
|
|   |   |
|   |   |   |
|
|
|   |
Template Sequence |   |
K | T | H | A | K | N | L | L | E | K | G | I | D | A | I | F | V | N | G | T | T | G | L | G | P | . |
. |
. |
. |
. |
. |
. |
. |
A | L | S | K | D | E | K | R | Q | N | L | N | A | L | Y | D | V | T | H | K | L | I | F | Q | V | G | S | L | N | L | N | D | V | M | E | L | V | K | F | S | N | E | M | D | I | L | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | T | S | T | T | T | T | G | G | . | . | . | . | . | . | . | . | G | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T |
| S |
|  |  |  |  |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
| S |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  | . | . | . | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
  |   |
239 | 240 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
V | M | L | G | G | M | L |
Query Conservation |   |
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|   |
Template Sequence |   |
V | S | S | H | S | P | Y |
Template Known Secondary structure |   |
 |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
95 | . | . | . | . | 100 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|