Return to main results Retrieve Phyre Job Id

Job DescriptionP60560
Confidence36.25%DateThu Jan 5 12:06:53 GMT 2012
Rank456Aligned Residues54
% Identity13%Templatec2d6fA_
PDB info PDB header:ligase/rnaChain: A: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d; PDBTitle: crystal structure of glu-trna(gln) amidotransferase in the2 complex with trna(gln)
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   160.........170.........180.........190.........200.........210.........220.....
Predicted Secondary structure 



































Query SS confidence 

































































Query Sequence  VTGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVSDGGCTTP
Query Conservation   
 
 
  
  



 
 
 
 

           
 
    
           




 



 
Alig confidence 


























............


























Template Conservation       
   
  
  



 
 
 

 ............
      
  
   

 

 



  
Template Sequence  ISPDIIKWHLDEGYRGIVIEGTGLGHC. . . . . . . . . . . . PDTLIPVIGEAHDMGVPVAMTSQCLNG
Template Known Secondary structure 

TT
SBTTTB
............
GGGTT

TT
SS
Template Predicted Secondary structure 










............








Template SS confidence 

































































   313......320.........330......... 340.........350.........360......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions