Job Description P60560 Confidence 28.61% Date Thu Jan 5 12:06:53 GMT 2012 Rank 496 Aligned Residues 175 % Identity 14% Template c2d69B_ PDB info PDB header:lyase Chain: B: PDB Molecule:ribulose bisphosphate carboxylase; PDBTitle: crystal structure of the complex of sulfate ion and octameric2 ribulose-1,5-bisphosphate carboxylase/oxygenase (rubisco) from3 pyrococcus horikoshii ot3 (form-2 crystal) Resolution 1.90 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.									.	.	.	.	80	.	.	.					.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.
Predicted Secondary structure																		.	.								.	.	.	.	.	.	.	.									.	.	.	.																													.
Query SS confidence																		.	.								.	.	.	.	.	.	.	.									.	.	.	.																													.
Query Sequence		N	M	D	T	V	G	T	F	S	M	A	S	A	L	A	S	.	.	F	D	I	L	T	A	V	.	.	.	.	.	.	.	.	H	K	H	Y	S	V	E	E	.	.	.	.	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	.	K	T	K	Q	I	L
Query Conservation																		.	.								.	.	.	.	.	.	.	.									.	.	.	.																													.
Alig confidence																		.	.								.	.	.	.	.	.	.	.									.	.	.	.																													.
Template Conservation
Template Sequence		P	K	M	G	W	S	V	E	E	Y	A	E	I	A	Y	E	L	W	S	G	G	I	D	L	L	K	D	D	E	N	F	T	S	F	P	F	N	R	F	E	E	R	V	R	K	L	Y	R	V	R	D	R	V	E	A	E	T	G	E	T	K	E	Y	L	I	N	I	T	G	P	V	N	I	M	E	K	R	A	E	M
Template Known Secondary structure		S	S	S																		T		S						T	T				B	T	T	B																					S	S							B			S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.														.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																																			.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	.	.	T	K	T	I	C	A	G	N	V	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G	P
Query Conservation																																			.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		V	A	N	E	G	G	Q	Y	V	M	I	D	I	.	.	.	.	V	V	A	G	W	S	A	L	Q	Y	M	R	E	V	T	E	D	L	G	L	A	I	H	A	H	R	A	M	H	A	A	F	T	R	N	P	R	H	G	I	T	M	L	A	L	A	K	A	A	R	M	I	G	V	D	Q	I	H	T	G	T	A	V
Template Known Secondary structure					T	T									.	.	.	.																			T								T	T	T					S		T	T	S															T		S
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.					.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																															.	.	.	.	.
Query SS confidence																															.	.	.	.	.
Query Sequence		G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	.	.	.	.	.	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A	D	F	V	M	L
Query Conservation																															.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	M	A	G	N	.	.	.	.	.	.	.	.	.	.	Y	E	E	I	K	R	I	N	D	F	L	L	S	K	W	E	H	I	R	P	V	F	P	V	A	S	G	G	L	H	P	G	L	M	P	E	L	I	R	L	F	G	K	D	L	V	I	Q
Template Known Secondary structure		S	S					.	.	.	.	.	.	.	.	.	.													S		B	T	T	B									S	S			G	G	G										S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		317	.	.	320	.	.											.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions