Job Description P60560 Confidence 100.00% Date Thu Jan 5 12:06:53 GMT 2012 Rank 30 Aligned Residues 220 % Identity 20% Template c2cdh1_ PDB info PDB header:transferase Chain: 1: PDB Molecule:enoyl reductase; PDBTitle: architecture of the thermomyces lanuginosus fungal fatty2 acid synthase at 5 angstrom resolution. Resolution 5.00 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.
Query Sequence		E	R	Q	F	T	F	K	H	S	G	Q	S	W	S	G	V	P	I	I	A	A	N	M	D	T	V	G	.	.	.	.	.	.	T	F	S	M	A	S	A	L	A	S	F	D	I	L	T	A	V	H	K	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T
Query Conservation																													.	.	.	.	.	.
Alig confidence						.	.	.	.	.																			.	.	.	.	.	.																									.	.	.	.
Template Conservation						.	.	.	.	.																																																	.	.	.	.
Template Sequence		T	T	T	I	.	.	.	.	.	L	G	F	K	I	S	M	P	I	M	I	A	P	T	A	M	Q	K	M	A	H	P	E	G	E	Y	A	T	A	R	A	A	S	A	A	G	T	I	M	T	L	S	S	W	A	T	S	S	.	.	.	.	V	E	E	V	A	S	T	G	P	G	I	R	F	F	Q	L	Y	V	Y
Template Known Secondary structure						.	.	.	.	.	T	T				S	S	S							S			T	T	T		T	T													S							T	T		S	S		.	.	.	.							T
Template Predicted Secondary structure						.	.	.	.	.																																																	.	.	.	.
Template SS confidence
		61	.	.	.						.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V	T	G	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.												.
Template Conservation																												.	.	.	.	.	.	.	.												.
Template Sequence		K	D	R	N	V	V	A	Q	L	V	R	R	A	E	R	A	G	F	K	A	I	A	L	T	V	W	.	.	.	.	.	.	.	.	K	D	V	A	W	L	Q	T	I	T	S	.	L	P	I	L	V	K	G	V	I	T	A	E	D	A	R	L	A	V	Q	H	G	A	A	G	I	I	V	S	N	H	G	A	R	Q
Template Known Secondary structure		S	S														T										S	.	.	.	.	.	.	.	.	S								T			.	S									S										T			S							G	G	G	T	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.												.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.									.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A	D	F	V	M	L	G	G	M	L	A	G	H	E	E	S	G	G	R	I	V	E	E	N	G	E	K	F	M	L
Query Conservation
Alig confidence			.	.	.	.	.	.																				.																																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.																				.																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	.	.	.	.	.	.	D	Y	V	P	A	T	I	M	A	L	E	E	V	V	K	A	A	Q	G	.	R	I	P	V	F	L	D	G	G	V	R	R	G	T	D	V	F	K	A	L	A	L	G	A	A	G	V	F	I	G	R	P	V	V	F	S	L	A	A	E	G	E	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	.	.	.	.	.	.	S	S															T	T	S	.	S	S						S	S			S										T	S		S						S									S	T	T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.																				.																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		259							260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	G	M	S	S	E	S	A	M	K	R	H	V	G	G	V	A	E	Y	R	A	A	E	G	K	T	V	K	L	P	L	R	G	P	V	E	N	T	A	R	D	I	L	G	G	L	R	S	A	C	T	Y	V	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	V	K	K	V	L	Q	M	M	R	D	E	F	E	L	T	M	A	L	S	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																			321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions