Return to main results Retrieve Phyre Job Id

Job DescriptionP60560
Confidence38.64%DateThu Jan 5 12:06:53 GMT 2012
Rank440Aligned Residues54
% Identity19%Templatec1zq1B_
PDB info PDB header:lyaseChain: B: PDB Molecule:glutamyl-trna(gln) amidotransferase subunit d; PDBTitle: structure of gatde trna-dependent amidotransferase from2 pyrococcus abyssi
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   160.........170.........180.........190.........200.........210.........220.....
Predicted Secondary structure 



































Query SS confidence 

































































Query Sequence  VTGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVSDGGCTTP
Query Conservation   
 
 
  
  



 
 
 
 

           
 
    
           




 



 
Alig confidence 


























............


























Template Conservation       
 
    
  



 
 
 


............
      
  
   

 

 



  
Template Sequence  ISSEIIDFLVDKGYKGIVIEGTGLGHT. . . . . . . . . . . . PNDIIPSIERAVEEGVAVCXTSQCIYG
Template Known Secondary structure 

TTT
S
BTTTB
............
TTTTT


SSSSS
Template Predicted Secondary structure 










............








Template SS confidence 

































































   316...320.........330.........340.. .......350.........360.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions