Return to main results Retrieve Phyre Job Id

Job DescriptionP60560
Confidence47.12%DateThu Jan 5 12:06:53 GMT 2012
Rank407Aligned Residues108
% Identity7%Templatec1ydnA_
PDB info PDB header:lyaseChain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35.
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.........120........ .130.........140.........150....... ..160.........170.........180
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Query Sequence  DADFEKTKQILDLNPALNFVCI. . DVANGYSEHFVQFVAKAREAWPTKTICAG. . . . NVVTGEMCEELILSGADIVKVGI
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Template Sequence  TPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAXLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDASV
Template Known Secondary structure 
T
STTS


TTS
GGGB
TTS
T

BT
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   153......160.........170.........180.........190.........200.........210.........220.........230..
 
   181........190.........200.........210....
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Query Sequence  GPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGG
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Template Sequence  GGLGGCPFAPGAKGNVDTVAVVEXLHEXGFETGL
Template Known Secondary structure  T

S
BTTBTTS

B
BTT
B


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   233......240.........250.........260......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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